LOCUS BC014171 2262 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens golgi-specific brefeldin A resistant guanine
nucleotide exchange factor 1, mRNA (cDNA clone IMAGE:4561065),
partial cds.
ACCESSION BC014171
VERSION BC014171.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2262)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2262)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC014171.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: i Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2262
/db_xref="H-InvDB:HIT000088303"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4561065"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2262
/gene="GBF1"
/gene_synonym="ARF1GEF"
/db_xref="GeneID:8729"
/db_xref="HGNC:HGNC:4181"
/db_xref="MIM:603698"
CDS <1..1648
/gene="GBF1"
/gene_synonym="ARF1GEF"
/codon_start=2
/product="GBF1 protein"
/protein_id="AAH14171.2"
/db_xref="GeneID:8729"
/db_xref="HGNC:HGNC:4181"
/db_xref="MIM:603698"
/translation="LDRGYTSDSEVYTDHGRPGKIHRSATDADVVNSGWLVVGKDDVD
NSKPGPSRPGPSPLINQYSLTVGLDLGPHDTKSLLKCVESLSFIVRDAAHITPDNFEL
CVKTLRIFVEASLNGGCKSQEKRGKSHKYDSKGNRFKKKSKEGSMLRRPRTSSQHASR
GGQSDDDEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAEEQRHLETGGQK
IEADSRTLWAHCWCPLLQGIACLCCDARRQVRMQALTYLQRALLVHDLQKLDALEWES
CFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLLSLSTFAALWL
TILDFMDKYMHAGSSDLLSEAIPESLKNMLLVMDTAEIFHSADARGGGPSALWEITWE
RIDCFLPHLRDELFKQTVIQDPMPMEPQGQKPLASAHLTSAAGDTRTPGHPPPPEIPS
ELGACDFEKPESPRAASSSSPGSPVASSPSRLSPTPDGPPPLAQPPLILQPLASPLQV
GVPPMTLPIILNPALIEATSPVPLLATPRPTDPIPTSEVN"
BASE COUNT 531 a 692 c 576 g 463 t
ORIGIN
1 cctggatcga gggtacactt ccgactcaga ggtctacact gaccatggca ggccgggcaa
61 gatacaccga tcagccacag atgccgatgt ggtcaacagt ggttggttag tggttgggaa
121 ggatgacgtt gataactcca agccagggcc cagccgccca ggcccttcac ccctgatcaa
181 tcaatacagc ctaacagtgg gactggattt ggggccacac gacactaagt ctctgcttaa
241 gtgtgtggaa tcgctgtcct tcatcgtgcg tgatgctgcc cacatcacac ctgacaactt
301 tgagctctgc gtcaagactc tccggatctt tgtggaggcc agtctgaatg gcggatgcaa
361 gtcccaggag aaacgtggca agagtcacaa atatgacagc aaagggaacc gcttcaagaa
421 gaaatccaaa gagggatcaa tgcttcgccg gcctcgaacc tccagccaac atgcctctcg
481 gggcgggcag agtgatgatg atgaggacga aggcgtgcct gccagctacc atacggtgtc
541 tttacaggtc agtcaggact tgctagacct gatgcacacc ctgcacacgc gggcagcctc
601 tatctacagc tcatgggcgg aggagcaacg ccacctggag acaggtggcc agaagattga
661 agctgattct cgcaccctct gggcccactg ctggtgccct ttactgcagg gtattgcctg
721 cctgtgctgc gatgcccggc gccaggtacg gatgcaggca ctgacctatc tgcagcgagc
781 actacttgta catgatctgc aaaagctaga tgccctggaa tgggagtcct gttttaacaa
841 ggtgctgttt cctctactta ccaagctctt ggagaacatc agccctgcag atgtgggtgg
901 gatggaggag acccggatga gggcttccac attgctctct aaggtcttcc tgcagcacct
961 gtctccactg ctgtcactct ctacctttgc ggccctctgg ctcaccatct tggacttcat
1021 ggacaagtac atgcacgcag gctccagcga cttactgtca gaggcgatcc ctgagtctct
1081 gaagaacatg cttctggtga tggacacagc ggagattttc cacagtgcag atgcacgggg
1141 aggcggcccc tcggccctct gggagatcac ctgggaacgc attgactgtt ttctccctca
1201 cctacgagat gaactcttca agcagaccgt catccaggac cccatgccca tggagcctca
1261 aggccaaaag cctctcgcct cagcccacct gacttccgct gctggcgaca ctaggacacc
1321 tggccatcca ccgcccccag agattccatc tgagctgggg gcctgtgact ttgagaagcc
1381 cgagagcccc cgagccgcca gcagcagctc cccaggatca ccagtggcct caagccccag
1441 caggctgagc cccacccccg acgggcctcc acccttggct cagcccccac tgatcctgca
1501 gcccttggcc tccccactgc aggtgggcgt gccacctatg actctgccca tcatcctcaa
1561 ccctgcgctc atcgaggcca cctcaccagt gcccctcctg gccacacccc gccccacaga
1621 tcccataccc acctctgagg tcaactaagg caggtcactc agagatcagg accagtgctt
1681 cccaccaggc tttccttgac cccacttctg gctgtcctgc gggccacaag ctcttcaggc
1741 caagtcagag ctgctgttgc tgccacttgg atggggacct gaaaaagaga atgttgatag
1801 ccccagctaa gacccccaat cagctgtggg acctttttcc tcctctgcgc tccattcctg
1861 ggggttcagc ctgagagtga actcagctgt catctgcagc ctctgcctcc agcccggcag
1921 ctctggggag gcatccgtgt gccggccctg cagtgcctgc ccacggtcag gcattgaaaa
1981 ctaagcccaa ccactctgca ctttgtttcc cactcccatt agccctgggc cacctcctcc
2041 agttcttcct cttttactaa ttagttggtc agtttggaga gttgactggc accatggagg
2101 gtaggcaggt gggggctggg tgggggactg cccacaggag catgtacata tggaaaaaca
2161 gaacaacagt ggacttttta tgatataata aatgtcttag taccagcaaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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