LOCUS BC014140 2462 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Bardet-Biedl syndrome 2, mRNA (cDNA clone MGC:20703
IMAGE:4653315), complete cds.
ACCESSION BC014140
VERSION BC014140.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2462)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2462)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014140.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: o Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22208996.
FEATURES Location/Qualifiers
source 1..2462
/db_xref="H-InvDB:HIT000036542"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20703 IMAGE:4653315"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2462
/gene="BBS2"
/gene_synonym="MGC20703"
/db_xref="GeneID:583"
/db_xref="HGNC:HGNC:967"
/db_xref="MIM:606151"
CDS 125..2290
/gene="BBS2"
/gene_synonym="MGC20703"
/codon_start=1
/product="Bardet-Biedl syndrome 2"
/protein_id="AAH14140.1"
/db_xref="GeneID:583"
/db_xref="HGNC:HGNC:967"
/db_xref="MIM:606151"
/translation="MLLPVFTLKLRHKISPRMVAIGRYDGTHPCLAAATQTGKVFIHN
PHTRNQHVSASRVFQSPLESDVSLLNINQAVSCLTAGVLNPELGYDALLVGTQTNLLA
YDVYNNSDLFYREVADGANVVVLGTLGDISSPLAIIGGNCALQGFNHEGSDLFWTVTG
DNVNSLALCDFDGDGKKELLVGSEDFDIRVFKEDEIVAEMTETEIVTSLCPMYGSRFG
YALSNGTVGVYDKTSRYWRIKSKNHAMSIHAFDLNSDGVNELITGWSNGKVDARSDRT
GEVIFKDNFSSAIAGVVEGDYRMDGHIQLICCSVDGEIRGYLPGTAEMRGNLMDTSAE
QDLIRELSQKKQNLLLELRNYEENAKAELASPLNEADGHRGIIPANTRLHTTLSVSLG
NETQTAHTELRISTSNDTIIRAVLIFAEGIFTGESHVVHPSIHNLSSSICIPIVPPKD
VPVDLHLKAFVGYRSSTQFHVFESTRQLPRFSMYALTSLDPASEPISYVNFTIAERAQ
RVVVWLGQNFLLPEDTHIQNAPFQVCFTSLRNGGHLHIKIKLSGEITINTDDIDLAGD
IIQSMASFFAIEDLQVEADFPVYFEELRKVLVKVDEYHSVHQKLSADMADHSNLIRSL
LVGAEDARLMRDMKTMKSRYMELYDLNRDLLNGYKIRCNNHTELLGNLKAVNQAIQRA
GRLRVGKPKNQVITACRDAIRSNNINTLFKIMRVGTASS"
BASE COUNT 665 a 546 c 608 g 643 t
ORIGIN
1 gtccggcctg aggcggctgg ggccgcgcag gtagtgtccc tgcacttctt gcccgggcgc
61 gtgaggccag ctccgctgcg cttgtctcca gcttccagcc ctcctcccct aagccgccgc
121 catcatgctg ctgcctgtgt tcaccctgaa actgcgccac aaaatcagcc cccgaatggt
181 ggccataggg cgctacgacg ggactcaccc gtgcctggcg gccgccaccc aaacgggcaa
241 ggtttttatt cataatcctc atacacggaa ccagcatgtc agtgcatcca gggtcttcca
301 gagccccctg gaatctgatg tttctcttct caacattaac caggcagtca gctgtctgac
361 tgcaggcgta ttgaaccctg agcttggcta tgatgccctt ttagtgggga cacagactaa
421 tcttttggct tatgatgtct acaataattc ggatttgttc tacagagagg tagcagatgg
481 ggcaaatgta gttgtgctgg ggacattggg agacatttct tcccctcttg cgattattgg
541 tggcaattgt gctctgcaag gtttcaatca tgaaggaagt gatctctttt ggacggttac
601 tggagacaat gttaattcct tggccttgtg tgactttgat ggtgatggaa agaaagagct
661 tcttgttgga tctgaggatt ttgatatccg agtttttaag gaagatgaga ttgtggcaga
721 aatgacagaa acagagatag tcacctctct ttgtcccatg tatggcagtc gatttggtta
781 tgccctttcc aatggcacag ttggagttta tgacaaaaca tcccgatact ggagaattaa
841 atcgaaaaat catgccatga gcattcatgc ttttgacctt aattctgatg gagtgaatga
901 actgataact ggttggtcca atgggaaggt tgatgctcga agtgaccgaa ctggggaggt
961 catctttaag gacaattttt cttctgcaat tgccggtgtg gtagagggag attaccggat
1021 ggatggccac atacagttaa tctgctgctc agtggatggg gaaatccggg gctacctgcc
1081 tggcacggct gagatgaggg gcaacctcat ggacaccagt gcagagcagg acctgatccg
1141 agagctgagt cagaagaagc agaatctgtt gctggaactc cgtaactatg aggaaaatgc
1201 caaggctgaa ttggccagtc cactgaacga ggctgatggg catcggggca taatcccagc
1261 caataccagg ctccacacca cgctctcagt cagcctgggg aatgagaccc aaactgctca
1321 tacagaatta cgcatttcca cttctaatga caccatcatc cgagcagtat tgatttttgc
1381 agaaggaatt tttacaggtg aaagccacgt ggtacatccc agcattcaca acctctccag
1441 ttccatctgc atccctattg tgcctcccaa agatgtccct gtggatctgc acttgaaggc
1501 attcgtgggt tacagaagca gcacccagtt tcatgtattt gaatcgacaa gacagctccc
1561 tcgattctcc atgtatgcgc tgaccagcct ggaccctgcc agtgagccaa tcagttatgt
1621 taactttacc attgcagaac gggcacagag ggttgttgta tggctcggtc agaactttct
1681 gttaccagaa gacactcaca ttcagaatgc tccatttcaa gtgtgtttca catctttacg
1741 gaatggcggc cacctgcata taaaaataaa acttagtgga gagatcacta taaatactga
1801 tgatattgat ttggctggtg atatcatcca gtcaatggca tcattttttg ctattgaaga
1861 ccttcaagta gaagcggatt ttcctgtcta ttttgaggaa ttacgaaagg tgctagttaa
1921 ggtggatgaa tatcattcag tgcatcagaa gctcagtgct gatatggctg atcattctaa
1981 tttgatccga agtttgctgg tcggagctga ggatgctcgt ctgatgaggg acatgaaaac
2041 aatgaagagt cgttatatgg aactctatga ccttaataga gacttgctaa atggatataa
2101 aattcgctgt aacaatcaca cagagctgtt gggaaacctc aaagcagtaa atcaagcaat
2161 tcaaagagca ggtcgtctgc gggttggaaa accaaagaac caggtgatca ctgcttgtcg
2221 ggatgcaatt cgaagcaata acatcaacac actgttcaaa atcatgcgag tggggacagc
2281 ttcttcctag gtgaggaaaa tacaggtcat gaagttcctg gcaaagattt tctgttaaaa
2341 acctatgctg gtttgctttg gatcacaccc tggtgaaccc cgggtgctaa gaatgaaaat
2401 aaccttggtg agttgtacaa attaaagaca aagaactaca tgtgaaaaaa aaaaaaaaaa
2461 aa
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