LOCUS BC014087 1996 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens synaptogyrin 3, mRNA (cDNA clone MGC:20003 IMAGE:4334996), complete cds. ACCESSION BC014087 VERSION BC014087.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1996) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1996) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC014087.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 28 Row: n Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22091456. FEATURES Location/Qualifiers source 1..1996 /db_xref="H-InvDB:HIT000036512" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20003 IMAGE:4334996" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1996 /gene="SYNGR3" /gene_synonym="MGC:20003" /db_xref="GeneID:9143" /db_xref="HGNC:HGNC:11501" /db_xref="MIM:603927" CDS 79..768 /gene="SYNGR3" /gene_synonym="MGC:20003" /codon_start=1 /product="synaptogyrin 3" /protein_id="AAH14087.1" /db_xref="GeneID:9143" /db_xref="HGNC:HGNC:11501" /db_xref="MIM:603927" /translation="MEGASFGAGRAGAALDPVSFARRPQTLLRVASWVFSIAVFGPIV NEGYVNTDSGPELRCVFNGNAGACRFGVALGLGAFLACAAFLLLDVRFQQISSVRDRR RAVLLDLGFSGLWSFLWFVGFCFLTNQWQRTAPGPATTQAGDAARAAIAFSFFSILSW VALTVKALQRFRLGTDMSLFATEQLSTGASQAYPGYPVGSGVEGTETYQSPPFTETLD TSPKGYQVPAY" BASE COUNT 350 a 672 c 587 g 387 t ORIGIN 1 cagcggcctc gggcggggcc ggccggacgg acaggcggac agaaggcgcc aggggcgcgc 61 gtcccgcccg ggccggccat ggagggcgcc tccttcggcg cgggccgcgc aggggccgcc 121 ctggaccccg tgagctttgc gcggcggccc cagaccctgc tccgggtcgc gtcctgggtg 181 ttctccatcg ccgtcttcgg gcccatcgtc aacgagggct acgtgaacac cgacagcggc 241 cccgagctgc gctgcgtgtt caacgggaac gcgggcgcct gccgcttcgg cgtcgcgctg 301 ggcctcggag ccttcctcgc ctgcgccgcc ttcctgctgc tcgatgtgcg cttccagcaa 361 atcagcagcg tccgcgaccg ccggcgcgcg gtgttgctgg acctgggctt ctcaggactc 421 tggtccttcc tgtggttcgt gggcttctgc ttcctcacca atcagtggca gcgcacggcg 481 ccagggccgg ccacgacgca ggcgggggac gcggcgcggg ccgccatcgc cttcagcttc 541 ttctccatcc tcagctgggt ggcgctcacc gtgaaggccc tgcagcggtt ccgcctgggc 601 accgacatgt cactcttcgc caccgaacag ctgagcaccg gggcgagcca ggcctacccc 661 ggctatccgg tgggcagcgg cgtggagggc accgagacct accagagccc gcccttcacc 721 gagaccctgg acaccagccc caaagggtac caggtgcccg cctactagcg gctggcaggc 781 acagaccagg gctccaaggc caccccacca acgcaggccc cagggtctcc gggacctccc 841 ttgggtcctt ccagctcagt gccgcggaca gagtaggtgg ccgctttgcg ccatccgggg 901 ccaagagggg gtggacccgc gtgtctgggc tgcccctgcc aagttccccc agtccctcag 961 cacctggccc caggactgag gtcctgagaa ggggatagca ctgcccagga cgtgtgtccc 1021 tagcctggaa tggactggcc tggggaaggc tttcccctct tgggccacac ctgctcactc 1081 tggggttggg ggtccagctg ccctctacga tcaggtgcag gggctgccca ggacaaagcg 1141 ggggcagggg aaagacacca ccctcgcccc aagactgggg atcctggcca ctgttcccat 1201 cccatgtccc tgtgggtagt gactgtctcg tttctgtcat ggtggtgcgt cccgtccgga 1261 gccactctcc actttctctc acaggctgct agaacagccc agccctgtca gtgttgtgat 1321 catggtccag tcttcgggtt tcacctccta gtactccaca agctgctcct ctctctgtgg 1381 ccccggcccc tgcccaggtg tgggtggttc tggccaggaa ggcacaaggt agctgtgggc 1441 caagacacca gccctgtcct agcccttcag taagaccttg ccaggagagg agaaggatgc 1501 ctgggtgcca ggcaagacaa gcccctcagc aggagagagg cccagaggct ccagctggcc 1561 accgtgcccc acaagatggc ccctgtgtgg ttccctttac cttggcttcc tggcccagtc 1621 cctgcctctc cacctgcacc ctgcttcctg gcccagtccc aggttggagt ccctctgcat 1681 agctgactac tcatgcattg ctcaaagctg gcttttcaca ttaagtcaac accaaacgtg 1741 gttgccacat ttcatcagac agacacctcc ctctggagat gcagttgagt gacaaccttg 1801 ttacattgta gcctagacca attctgtgtg gatatttaag tgaacatgtt tacaattttt 1861 gtatatatca ctctctccct ctcctgaaag accagagatt gtgtattttc agtgtcccat 1921 gttccgactg caccttcttt acaataaaga ctgtaactga gctgactgtg aaaaaaaaaa 1981 aaaaaaaaaa aaaaaa //