LOCUS BC014059 1889 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA
clone IMAGE:3936239), partial cds.
ACCESSION BC014059
VERSION BC014059.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1889)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1889)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC014059.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: f Column: 6.
FEATURES Location/Qualifiers
source 1..1889
/db_xref="H-InvDB:HIT000088267"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3936239"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1889
/gene="SNAP47"
/gene_synonym="HEL170"
/gene_synonym="SNAP-47"
/gene_synonym="SVAP1"
/db_xref="GeneID:116841"
/db_xref="HGNC:HGNC:30669"
CDS <1..1310
/gene="SNAP47"
/gene_synonym="HEL170"
/gene_synonym="SNAP-47"
/gene_synonym="SVAP1"
/codon_start=3
/product="SNAP47 protein"
/protein_id="AAH14059.2"
/db_xref="GeneID:116841"
/db_xref="HGNC:HGNC:30669"
/translation="QRQKRPGPWRTQTQEQMSRDVCIHTWPCTYYLEPKRRWVTGQLS
LTSLSLRFMTDSTGEILVSFPLSSIVEIKKEASHFIFSSITILEKGHAKHWFSSLRPS
RNVVFSIIEHFWRELLLSQPGAVADASVPRTRGEELTGLMAGSQKRLEDTARVLHHQG
QQLDSVMRGLDKMESDLEVADRLLTELESPAWWPFSSKLWKTPPETKPREDVSMTSCE
PFGKEGILIKIPAVISHRTESHVKPGRLTVLVSGLEIHDSSSLLMHRFEREDVDDIKV
HSPYEISIRQRFIGKPDMAYRLISAKMPEVIPILEVQFSKKMELLEDALVLRSARTSS
PAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTSLPALSEADTQELTQILRRM
KGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMKRLT"
BASE COUNT 465 a 507 c 529 g 388 t
ORIGIN
1 ctcagaggca gaagaggcct ggaccttggc gcacacagac ccaggaacag atgagcaggg
61 atgtctgcat ccacacctgg ccgtgcacct actacctgga gcccaagagg cgatgggtta
121 ctggacagct gtccttaaca tcgctgtcgc tcaggttcat gactgacagc actggagaga
181 ttctggtcag cttccccctc tccagcatag ttgagatcaa gaaggaggct tcacatttta
241 tcttcagctc catcaccatc ctggagaagg gccatgccaa gcactggttc agctccctgc
301 ggccaagtcg aaatgtggtc ttcagcatca tcgagcattt ctggagggag ctgctgctgt
361 ctcagcctgg agccgtggca gacgcatctg tcccaaggac ccggggcgag gagctgacgg
421 gactcatggc tggatcccag aaacgcctgg aggacacggc gagggtcctg caccaccagg
481 gccagcagct ggacagcgtc atgagaggcc tggacaagat ggagtcagac ctggaggtgg
541 cggacagatt gctgacagaa ctggaatctc ctgcttggtg gccctttagc tccaagcttt
601 ggaagacacc accggaaaca aagcccaggg aagatgtctc catgaccagt tgtgaaccct
661 ttgggaaaga agggatactg ataaaaattc ctgctgttat ttcccacaga acagagtctc
721 acgttaaacc agggaggctc accgtccttg tgtctgggtt ggaaatacat gactccagtt
781 ctttgctcat gcacaggttt gaaagagaag acgtggacga catcaaggtc cactcacctt
841 acgaaattag catccgccag cggtttattg gaaagccaga catggcctat cgtttgatat
901 ctgccaagat gccagaggtt atccccattt tagaagtgca gttcagcaag aagatggagc
961 tgttagaaga tgcattggtg ctcagaagcg caagaacctc ttcccccgca gagaagagct
1021 gctcagtctg gcatgcagca tctgggctga tgggccgtac cctgcaccgt gagccacccg
1081 caggagacca ggagggcaca gcactgcacc tgcagacaag cctgccagcc ctttctgagg
1141 cagataccca ggaactaacc cagatcctga ggaggatgaa ggggctggcc ctggaggccg
1201 agagtgagct ggagagacaa gacgaagccc tggatggcgt tgcagcagct gtggacaggg
1261 caaccttgac catcgacaag cacaacaggc ggatgaagag gctgacctag gggcagaacg
1321 tccctgcatt cctgtctcac cctgcacatc ccgctgagat ggagggctgg gcggcagtgc
1381 cagggctgca gaggcctgtg gccctccgga gtggtcttcc tctggatggg gctgctactg
1441 tggggctgct tctgcaccag gggcctcccc aggtgtgcac catgcctgcc tcccacttgg
1501 ctgtccctgc tgctgggcag gacccggcca catgttctgc ggatgctgca gaagtgtgga
1561 ccatggcggg accccaagga cacttggcac aggcctggaa gaggccgccc tcgtcttgtc
1621 tcggctccct ttcatggaca gactggcctt cttagctgta ctataaattt gtgagtgaag
1681 ttagagccca gctcacttag ccagctcact ttgagggcat cctataaaca cccaactgtt
1741 cttttatcgt ctcggtttta gccaaaagtg aaattagcat gactgcatct ttcaaacaaa
1801 aatattgatt tctgctttta gggccccgtt tccatccaga aataaaggga aatgctggct
1861 tcaaaaaaaa aaaaaaaaaa aaaaaaaaa
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