LOCUS BC014013 2675 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:3956428), partial cds. ACCESSION BC014013 VERSION BC014013.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2675) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2675) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC014013.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 28 Row: h Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25777599. FEATURES Location/Qualifiers source 1..2675 /db_xref="H-InvDB:HIT000088254" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3956428" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>2675 /gene="PSMD1" /gene_synonym="P112" /gene_synonym="S1" /db_xref="GeneID:5707" CDS 132..>2675 /gene="PSMD1" /gene_synonym="P112" /gene_synonym="S1" /codon_start=1 /product="PSMD1 protein" /protein_id="AAH14013.1" /db_xref="GeneID:5707" /translation="MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDK IEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIA KCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRL DVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQ CLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIA SVPGSTNTGTVPGSEKDSDSMETEEKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMA IELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEW LARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIH ANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVT GEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADAL IESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGF ILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNY VRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAG GHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMP KVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKKKKKKK" misc_feature 135..2639 /gene="PSMD1" /gene_synonym="P112" /gene_synonym="S1" /note="RPN2; Region: COG5116, RPN2, 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]" /db_xref="CDD:COG5116" BASE COUNT 797 a 528 c 640 g 710 t ORIGIN 1 gaggaggcga ctgactgagc agcgcacccg gggagaaagg aggcgcggtg aactgagcgg 61 cccctgagct gacagataca ctgcgcagct ggaacggcga gcgagccgac gggcgagtga 121 ggggcgcagc catgatcacc tcggccgctg gaattatttc tcttctggat gaagatgaac 181 cacagcttaa ggaatttgca ctacacaaat tgaatgcagt tgttaatgac ttctgggcag 241 aaatttccga gtccgtagac aaaatagagg ttttatacga agatgaaggt ttccggagtc 301 ggcagtttgc agccttagtg gcatctaaag tattttatca cctgggggct tttgaggagt 361 ctctgaatta tgctcttgga gcaggggacc tcttcaatgt caatgataac tctgaatatg 421 tggaaactat tatagcaaaa tgcattgatc actacaccaa acaatgtgtg gaaaatgcag 481 atttgcctga aggagaaaaa aaaccaattg accagagatt ggaaggcatc gtaaataaaa 541 tgttccagcg atgtctagat gatcacaagt ataaacaggc tattggcatt gctctggaga 601 cacgaagact ggacgtcttt gaaaagacca tactggagtc gaatgatgtc ccaggaatgt 661 tagcttatag ccttaagctc tgcatgtctt taatgcagaa taaacagttt cggaataaag 721 tactaagagt tctagttaaa atctacatga acttggagaa acctgatttc atcaatgttt 781 gtcagtgctt aattttctta gatgatcctc aggctgtgag tgatatctta gagaaactgg 841 taaaggaaga caacctcctg atggcatatc agatttgttt tgatttgtat gaaagtgcta 901 gccagcagtt tttgtcatct gtaatccaga atcttcgaac tgttggcacc cctattgctt 961 ctgtgcctgg atccactaat acgggtactg ttccgggatc agagaaagac agtgactcga 1021 tggaaacaga agaaaagaca agcagtgcat ttgtaggaaa gacaccagaa gccagtccag 1081 agcctaagga ccagactttg aaaatgatta aaattttaag tggtgaaatg gctattgagt 1141 tacatctgca gttcttaata cgaaacaata atacagacct catgattcta aaaaacacaa 1201 aggatgcagt acggaattct gtatgtcata ctgcaaccgt tatagcaaac tcttttatgc 1261 actgtgggac aaccagtgac cagtttctta gagataattt ggaatggtta gccagagcca 1321 ctaactgggc aaaatttact gctacagcca gtttgggtgt aattcataag ggtcatgaaa 1381 aagaagcatt acagttaatg gcaacatacc ttcccaagga tacttctcca ggatcagcct 1441 atcaggaagg tggaggtctc tatgcactag gtcttattca tgccaatcat ggtggtgata 1501 taattgacta tctgcttaat cagcttaaga acgccagcaa tgatatcgtt agacacggtg 1561 gcagtctggg ccttggtttg gcagccatgg gaactgcacg tcaagatgtt tatgatttgc 1621 taaaaacaaa cctttatcag gatgatgcag taacagggga agcagctggc ctggccctag 1681 gtttggttat gttgggctct aaaaatgctc aggctattga ggacatggtt ggttatgcac 1741 aagaaactca acatgagaag attctgcgtg gtcttgcagt tggcatagct ttagtaatgt 1801 atgggaggat ggaagaggct gatgctctca ttgaatctct ctgtcgtgac aaggacccaa 1861 ttcttcgaag gtctggaatg tatactgtag ccatggctta ttgtggctct ggtaacaaca 1921 aagcaattcg acgcctgcta catgttgctg taagtgatgt taatgatgat gtcaggaggg 1981 cagcagtaga atcacttggg ttcattctat tcagaacccc tgaacagtgc ccaagtgttg 2041 tctctttgtt gtcagagagt tacaaccctc atgtgcgcta cggagctgca atggccttgg 2101 ggatatgctg tgctggtaca ggaaacaagg aagccattaa tttgctagaa ccaatgacaa 2161 acgaccccgt gaactacgtg aggcaagggg cactcatagc ttcagctctc atcatgatcc 2221 agcagactga aatcacttgt ccaaaggtga atcagttcag acagctgtat tccaaagtca 2281 tcaatgataa gcatgatgat gtcatggcca agtttggcgc tattctggcc cagggcatac 2341 tggatgcagg tggtcataat gtcacaatct ccttgcagtc caggactggg catactcata 2401 tgccttctgt ggttggcgtc cttgtattta cccagttttg gttctggttt cctctttcac 2461 acttcctgtc attggcttat acccctacct gtgtcattgg ccttaacaag gacttaaaga 2521 tgccgaaagt tcagtataaa tcgaactgta aaccatccac atttgcatat cctgcccctc 2581 tggaagtacc aaaagaaaaa gaaaaggaaa aggtttctac tgctgtatta tctataactg 2641 ccaaggctaa aaagaagaaa aaaaaaaaaa aaaaa //