LOCUS BC013998 2336 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens paired-like homeodomain 2, mRNA (cDNA clone MGC:20144 IMAGE:3937807), complete cds. ACCESSION BC013998 VERSION BC013998.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2336) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2336) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC013998.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 28 Row: f Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40316913. FEATURES Location/Qualifiers source 1..2336 /db_xref="H-InvDB:HIT000036457" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20144 IMAGE:3937807" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2336 /gene="PITX2" /gene_synonym="ARP1" /gene_synonym="Brx1" /gene_synonym="IDG2" /gene_synonym="IGDS" /gene_synonym="IGDS2" /gene_synonym="Otlx2" /gene_synonym="PTX2" /gene_synonym="RS" /db_xref="GeneID:5308" /db_xref="HGNC:HGNC:9005" /db_xref="MIM:601542" CDS 638..1612 /gene="PITX2" /gene_synonym="ARP1" /gene_synonym="Brx1" /gene_synonym="IDG2" /gene_synonym="IGDS" /gene_synonym="IGDS2" /gene_synonym="Otlx2" /gene_synonym="PTX2" /gene_synonym="RS" /codon_start=1 /product="paired-like homeodomain 2" /protein_id="AAH13998.1" /db_xref="GeneID:5308" /db_xref="HGNC:HGNC:9005" /db_xref="MIM:601542" /translation="MNCMKGPLHLEHRAAGTKLSAVSSSSCHHPQPLAMASVLAPGQP RSLDSSKHRLEVHTISDTSSPEAAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQ QLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCK NGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSMF SPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTP PYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV" BASE COUNT 566 a 616 c 629 g 525 t ORIGIN 1 gttaggccaa cagggaagcg cggagccgca gatctggtcc gtcgctcgcc tgggtgcctg 61 gagctgagct gcggcaaggc ccggctcctg ttcgaccgcc cgaggggtgt gcgtgtgcgc 121 gttgcggagg gtgcgctcag agggccgcgt cgtggctgca gcggctgctg ccgccgcagg 181 ggatctaata tcacctacct gtccctgtca ctcttgacac ttctctgtca gggctgccgc 241 gtgggggggg gcgggcagag cgcggtcggc gttagctttc cttattggag gggttcttgg 301 gggagggagg gagagaagaa gggggtcttt gcccactctt gtttcgcttt ggagcttgga 361 agcctgctcc ctaaagacgc tctgagtggt gcccttctgc ccacatccca tgtcttcgtt 421 tgcccgctga ctttccgtct ccggactttt tcgcttgagc cttccggagg agacgggggc 481 agcttggctt gagaactcgg cgggggttgc gtcccctggc tctccccgca gcggggaaac 541 tccgcgccta gagcgcgacc cggagcgggc agcggcggct acgggggctc ggcggggcag 601 tagccaagga ctagtagagc gtcgcgctcc ctcgtccatg aactgcatga aaggcccgct 661 tcacttggag caccgagcag cggggaccaa gctgtcggcc gtctcctcat cttcctgtca 721 ccatccccag ccgttagcca tggcttcggt tctggctccc ggtcagcccc ggtcgctgga 781 ctcctccaag cacaggctgg aggtgcacac catctccgac acctccagcc cggaggccgc 841 agagaaagat aaaagccagc aggggaagaa tgaggacgtg ggcgccgagg acccgtctaa 901 gaagaagcgg caaaggcggc agcggactca ctttaccagc cagcagctcc aggagctgga 961 ggccactttc cagaggaacc gctacccgga catgtccaca cgcgaagaaa tcgctgtgtg 1021 gaccaacctt acggaagccc gagtccgggt ttggttcaag aatcgtcggg ccaaatggag 1081 aaagagggag cgcaaccagc aggccgagct atgcaagaat ggcttcgggc cgcagttcaa 1141 tgggctcatg cagccctacg acgacatgta cccaggctat tcctacaaca actgggccgc 1201 caagggcctt acatccgcct ccctatccac caagagcttc cccttcttca actctatgaa 1261 cgtcaacccc ctgtcatcac agagcatgtt ttccccaccc aactctatct cgtccatgag 1321 catgtcgtcc agcatggtgc cctcagcagt gacaggcgtc ccgggctcca gtctcaacag 1381 cctgaataac ttgaacaacc tgagtagccc gtcgctgaat tccgcggtgc cgacgcctgc 1441 ctgtccttac gcgccgccga ctcctccgta tgtttatagg gacacgtgta actcgagcct 1501 ggccagcctg agactgaaag caaagcagca ctccagcttc ggctacgcca gcgtgcagaa 1561 cccggcctcc aacctgagtg cttgccagta tgcagtggac cggcccgtgt gagccgcacc 1621 cacagcgccg ggatcctagg accttgccgg atggggcaac tccgcccttg aaagactggg 1681 aattatgcta gaaggtcgtg ggcactaaag aaagggagag aaagagaagc tatatagaga 1741 aaaggaaacc actgaatcaa agagagagct cctttgattt caaagggatg tcctcagtgt 1801 ctgacatctt tcactacaag tatttctaac agttgcaagg acacatacac aaacaaatgt 1861 ttgactggat atgacatttt aacattacta taagcttgtt attttttaag tttagcattg 1921 ttaacattta aatgactgaa aggatgtata tatatcgaaa tgtcaaatta attttataaa 1981 agcagttgtt agtaatatca caacagtgtt tttaaaggtt aggctttaaa ataaagcatg 2041 ttatacagaa gcgattagga tttttcgctt gcgagcaagg gagtgtatat actaaatgcc 2101 acactgtatg tttctaacat attattatta ttataaaaaa tgtgtgaata tcagttttag 2161 aatagtttct ctggtggatg caatgatgtt tctgaaactg ctatgtacaa cctaccctgt 2221 gtataacatt tcgtacaata ttattgtttt acttttcagc aaatatgaaa caaatgtgtt 2281 ttatttcatg ggagtaaaat atactgcata caaaaaaaaa aaaaaaaaaa aaaaaa //