LOCUS BC013988 1675 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 49, mRNA (cDNA clone
MGC:19860 IMAGE:3349493), complete cds.
ACCESSION BC013988
VERSION BC013988.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1675)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1675)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC013988.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51558750.
FEATURES Location/Qualifiers
source 1..1675
/db_xref="H-InvDB:HIT000036449"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19860 IMAGE:3349493"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1675
/gene="C11orf49"
/gene_synonym="FLJ22210"
/gene_synonym="MGC4707"
/db_xref="GeneID:79096"
/db_xref="HGNC:HGNC:28720"
CDS 29..1042
/gene="C11orf49"
/gene_synonym="FLJ22210"
/gene_synonym="MGC4707"
/codon_start=1
/product="chromosome 11 open reading frame 49"
/protein_id="AAH13988.1"
/db_xref="GeneID:79096"
/db_xref="HGNC:HGNC:28720"
/translation="MLSPERLALPDYEYLAQRHVLTYMEDAVCQLLENREDISQYGIA
RFFTEYFNSVCQGTHILFREFSFVQATPHNRVSFLRAFWRCFRTVGKNGDLLTMKEYH
CLLQLLCPDFPLELTQKAARIVLMDDAMDCLMSFSDFLFAFQIQFYYSEFLDSVAAIY
EDLLSGKNPNTVIVPTSSSGQHRQRPALGGAGTLEGVEASLFYQCLENLCDRHKYSCP
PPALVKEALSNVQRLTFYGFLMALSKHRGINQALGALPDKGDLMHDPAMDEELERLLL
PFFRLAQVPGLVNSVTASPEASCLPSRTPPRVGSPWRPLHHSRKVDGESDGSTEETDE
SET"
BASE COUNT 405 a 484 c 419 g 367 t
ORIGIN
1 ggagctttga agccaccccg gtcaaaggat gctgagtccg gagcgcctag ccctaccgga
61 ctacgagtat ctggctcagc gacatgtcct cacctacatg gaggatgcag tgtgccagct
121 gctagaaaac agggaagata ttagccaata tggaattgcc aggttcttca ctgaatattt
181 taacagtgta tgccagggaa cacacattct ctttcgagaa ttcagcttcg tccaagccac
241 cccccacaat agggtatcat ttttacgggc cttctggaga tgcttccgaa ctgtgggcaa
301 aaatggcgat ttgctgacca tgaaagaata tcactgtttg ctgcaattac tgtgtcctga
361 tttcccgctg gagctcactc agaaagcagc caggattgtg ctcatggacg atgccatgga
421 ctgcttgatg tctttttcag atttcctctt tgccttccag atccagtttt actactcaga
481 attcctggac agtgtggctg ccatctatga ggacctgctg tcaggcaaga accccaacac
541 agtgattgtg ccgacgtcgt ccagtgggca gcaccgccaa cgacctgcct tgggcggggc
601 cggcacgctg gagggcgtgg aggcgtcgct gttctaccag tgtctggaaa acctgtgtga
661 tcggcacaag tacagctgcc cacccccagc acttgtcaaa gaggccctca gcaatgttca
721 gagactgacc ttctatggat tcctcatggc tctctcaaag caccgtggaa tcaaccaagc
781 cctcggagct ttgcctgaca agggggatct gatgcacgac ccagcaatgg atgaagagct
841 ggaacggctg cttcttccct tcttcaggct ggcccaggtc ccaggcctgg tcaactcggt
901 cacagccagt ccagaggcca gttgcctgcc ttcccggacc cctccccggg ttggctctcc
961 ctggagacct ctccatcatt cccgaaaagt ggatggagag agtgatggct ccactgaaga
1021 gacagacgag tcggagactt gaggagtcca aagggtcctg cccacagcgc cctgtacctg
1081 ctcccaccca gcccttggtg tgcccaccca gcctcctctc cagcaccttg ctgtgctgcc
1141 ctctgctgct gacaaggtga ataacagccc caagaccagc cagaggggct ctgatgatca
1201 gcccagccag tggccccgga aggtgaatgg cctgctctcc ctggccctat cagcctgtga
1261 acttcactta ggccccaagc tgacagactg tgctgaggcc accttgtcac gccgtagcct
1321 gttagtcctc ctaacctctt aagagcagtc tcttctgagc cagcctctgc gggtccccca
1381 ataaggttca tctcctcaca gcaactccat taagggggag aacccgaata gccacgcagg
1441 gccttgcacc atcaagggtg acacctgcga cgcaagtacc aggaggacat aaccgctgtg
1501 gcctgttgga gaacagccag tagccttggt aatatgaagg gtgggccaga agatgatttc
1561 acttgcaaaa actgcttcaa gtcttgaccc ctttgtgtct aatagctaaa caaacatgtg
1621 aaacgaataa aaagtccctc atgtctggta aaaaaaaaaa aaaaaaaaaa aaaaa
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