LOCUS BC013984 1456 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade F (alpha-2
antiplasmin, pigment epithelium derived factor), member 1, mRNA
(cDNA clone MGC:20155 IMAGE:3531777), complete cds.
ACCESSION BC013984
VERSION BC013984.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1456)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1456)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC013984.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: b Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792142.
FEATURES Location/Qualifiers
source 1..1456
/db_xref="H-InvDB:HIT000036446"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20155 IMAGE:3531777"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1456
/gene="SERPINF1"
/gene_synonym="EPC-1"
/gene_synonym="PIG35"
/db_xref="GeneID:5176"
/db_xref="HGNC:HGNC:8824"
/db_xref="MIM:172860"
CDS 57..1313
/gene="SERPINF1"
/gene_synonym="EPC-1"
/gene_synonym="PIG35"
/codon_start=1
/product="serpin peptidase inhibitor, clade F (alpha-2
antiplasmin, pigment epithelium derived factor), member 1"
/protein_id="AAH13984.1"
/db_xref="GeneID:5176"
/db_xref="HGNC:HGNC:8824"
/db_xref="MIM:172860"
/translation="MQALVLLLCIGALLGHSSCQNPASPPEEGSPDPDSTGALVEEED
PFFKVPVNKLAAAVSNFGYDLYRVRSSMSPTTNVLLSPLSVATALSALSLGAEQRTES
IIHRALYYDLISSPDIHGTYKELLDTVTARQKNLKSASRIVFEKKLRIKSSFVAPLEK
SYGTRPRVLTGNPRLDLQEINNWVQAQMKGKLARSTKEIPDEISILLLGVAHFKGQWV
TKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTGSMSIIF
FLPLKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKL
QSLFDSPDFSKITGKPIKLTQVEHRAGFEWNEDGAGTTPSPGLQPAHLTFPLDYHLNQ
PFIFVLRDTDTGALLFIGKILDPRGP"
BASE COUNT 370 a 425 c 375 g 286 t
ORIGIN
1 caggcttaga gggactaggc tgggtgtgga gctgcagcgt atccacaggc cccaggatgc
61 aggccctggt gctactcctc tgcattggag ccctcctcgg gcacagcagc tgccagaacc
121 ctgccagccc cccggaggag ggctccccag accccgacag cacaggggcg ctggtggagg
181 aggaggatcc tttcttcaaa gtccccgtga acaagctggc agcggctgtc tccaacttcg
241 gctatgacct gtaccgggtg cgatccagca tgagccccac gaccaacgtg ctcctgtctc
301 ctctcagtgt ggccacggcc ctctcggccc tctcgctggg agcggagcag cgaacagaat
361 ccatcattca ccgggctctc tactatgact tgatcagcag cccagacatc catggtacct
421 ataaggagct ccttgacacg gtcactgccc gccagaagaa cctcaagagt gcctcccgga
481 tcgtctttga gaagaagctg cgcataaaat ccagctttgt ggcacctctg gaaaagtcat
541 atgggaccag gcccagagtc ctgacgggca accctcgctt ggacctgcaa gagatcaaca
601 actgggtgca ggcgcagatg aaagggaagc tcgccaggtc cacaaaggaa attcccgatg
661 agatcagcat tctccttctc ggtgtggcgc acttcaaggg gcagtgggta acaaagtttg
721 actccagaaa gacttccctc gaggatttct acttggatga agagaggacc gtgagggtcc
781 ccatgatgtc ggaccctaag gctgttttac gctatggctt ggattcagat ctcagctgca
841 agattgccca gctgcccttg accggaagca tgagtatcat cttcttcctg cccctgaaag
901 tgacccagaa tttgaccttg atagaggaga gcctcacctc cgagttcatt catgacatag
961 accgagaact gaagaccgtg caggcggtcc tcactgtccc caagctgaag ctgagttacg
1021 aaggcgaagt caccaagtcc ctgcaggaga tgaagctgca atccttgttt gattcaccag
1081 actttagcaa gatcacaggc aaacccatca agctgactca ggtggaacac cgggctggct
1141 ttgagtggaa cgaggatggg gcgggaacca cccccagccc agggctgcag cctgcccacc
1201 tcaccttccc gctggactat caccttaacc agcctttcat cttcgtactg agggacacag
1261 acacaggggc ccttctcttc attggcaaga ttctggaccc caggggcccc taatatccca
1321 gtttaatatt ccaataccct agaagaaaac ccgagggaca gcagattcca caggacacga
1381 aggctgcccc tgtaaggttt caatgcatac aataaaagag ctttatccct aaaaaaaaaa
1441 aaaaaaaaaa aaaaaa
//