LOCUS BC013983 2882 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens sparc/osteonectin, cwcv and kazal-like domains
proteoglycan (testican) 3, mRNA (cDNA clone MGC:20285
IMAGE:4110883), complete cds.
ACCESSION BC013983
VERSION BC013983.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2882)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2882)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013983.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: i Column: 12.
FEATURES Location/Qualifiers
source 1..2882
/db_xref="H-InvDB:HIT000036445"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20285 IMAGE:4110883"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2882
/gene="SPOCK3"
/gene_synonym="HSAJ1454"
/gene_synonym="TES-3"
/db_xref="GeneID:50859"
/db_xref="HGNC:HGNC:13565"
/db_xref="MIM:607989"
CDS 101..1402
/gene="SPOCK3"
/gene_synonym="HSAJ1454"
/gene_synonym="TES-3"
/codon_start=1
/product="sparc/osteonectin, cwcv and kazal-like domains
proteoglycan (testican) 3"
/protein_id="AAH13983.1"
/db_xref="GeneID:50859"
/db_xref="HGNC:HGNC:13565"
/db_xref="MIM:607989"
/translation="MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQW
LTTISQYDKEVGQWNKFRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQD
SQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCK
LEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALH
ESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLD
KNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQY
IPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFASGDF
HEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI"
BASE COUNT 934 a 480 c 602 g 866 t
ORIGIN
1 gagacggcgg cgcgtgcagc agctccagaa agcagcgagt tggcagagca gggctgcatt
61 tccagcagga gctgcgagca cagtgctggc tcacaacaag atgctcaagg tgtcagccgt
121 actgtgtgtg tgtgcagccg cttggtgcag tcagtctctc gcagctgccg cggcggtggc
181 tgcagccggg gggcggtcgg acggcggtaa ttttctggat gataaacaat ggctcaccac
241 aatctcccag tatgacaagg aagtcggaca gtggaacaaa ttccgagacg atgattattt
301 ccgcacttgg agtccaggaa aacccttcga tcaggcttta gatccagcta aggatccatg
361 cttaaagatg aaatgtagtc gccataaagt atgcattgct caagattctc agactgcagt
421 ctgcattagt caccggaggc ttacacacag gatgaaagaa gcaggagtag accataggca
481 gtggaggggt cccatattat ccacctgcaa gcagtgccca gtggtctatc ccagccctgt
541 ttgtggttca gatggtcata cctactcttt tcagtgcaaa ctagaatatc aggcatgtgt
601 cttaggaaaa cagatctcag tcaaatgtga aggacattgc ccatgtcctt cagataagcc
661 caccagtaca agcagaaatg ttaagagagc atgcagtgac ctggagttca gggaagtggc
721 aaacagattg cgggactggt tcaaggccct tcatgaaagt ggaagtcaaa acaagaagac
781 aaaaacattg ctgaggcctg agagaagcag attcgatacc agcatcttgc caatttgcaa
841 ggactcactt ggctggatgt ttaacagact tgatacaaac tatgacctgc tattggacca
901 gtcagagctc agaagcattt accttgataa gaatgaacag tgtaccaagg cattcttcaa
961 ttcttgtgac acatacaagg acagtttaat atctaataat gagtggtgct actgcttcca
1021 gagacagcaa gacccacctt gccagactga gctcagcaat attcagaagc ggcaaggggt
1081 aaagaagctc ctaggacagt atatccccct gtgtgatgaa gatggttact acaagccaac
1141 acaatgtcat ggcagtgttg gacagtgctg gtgtgttgac agatatggaa atgaagtcat
1201 gggatccaga ataaatggtg ttgcagattg tgctatagat tttgagatct ccggagattt
1261 tgctagtggc gattttcatg aatggactga tgatgaggat gatgaagacg atattatgaa
1321 tgatgaagat gaaattgaag atgatgatga agatgaaggg gatgatgatg atggtggtga
1381 tgaccatgat gtatacattt gattgatgac agttgaaatc aataaattct acatttctaa
1441 tatttacaaa aatgatagcc tatttaaaat tatcttcttc cccaataaca aaatgattct
1501 aaacctcaca tatattttgt ataattattt gaaaaattgc agctaaagtt atagaacttt
1561 atgtttaaat aagaatcatt tgctttgagt ttttatattc cttacacaaa aagaaaatac
1621 atatgcagtc tagtcagaca aaataaagtt ttgaagtgct actataataa atttttcacg
1681 agaacaaact ttgtaaatct tccataagca aaatgacagc tagtgcttgg gatcgtacat
1741 gttaattttt tgaaagataa ttctaagtga aatttaaaat aaataaattt ttaatgacct
1801 gggtcttaag gatttaggaa aaatatgcat gctttaattg catttccaaa gtagcatctt
1861 gctagaccta gatgagtcag gataacagag agataccaca tggcaagaaa aacaaagtga
1921 caattgtaga gtcctcaatt gtgtttacat taatagtggt gtttttacct atgaaattat
1981 tctggatcta acaggacatt ttacaaaatg gcaagtatgg aaaaccatgg attctgaaag
2041 ttaaaaattt agttgttctc cccaatgtgt attttaattt ggatggcagt ctcatgcaga
2101 ttttttaaaa gattctttaa taacatgatt tgtttgcctt tctagatttc tttatctttc
2161 tgaccagcaa cttagggagc agaatttaaa ttaggaagac aaagggaaag atccatttaa
2221 accatatttt tacaaagttt gtcatttgcc ccaagatcaa attttaaatt cttaattttc
2281 attttatttc ccattttagg taaaagtttg catttaatct tagaattatg ttatttttgt
2341 tagtagtgtg gaaacttaga gaacttattg tatggtgcct tgcaaaaata gagatagaaa
2401 gattttagca tgcataccaa tatagtatat tacgcaatat ataagcacac ctaattaaca
2461 gattaatatc agtaaaggta ttgctgctgg aatgaagaaa atgggatacg tttctttctt
2521 tttttctatt gttacataat tgccatgtgg acttgtttat gattattgtg tagagtagca
2581 tttaagattt aactgtagca aaaattactt taaccgctgt atttaagtta gcatgttaat
2641 taattgtgta gacattttgg cacaccatca cttttaacta tatcatacca atggttttgt
2701 gcccataata aaaatggaaa aacctgttga atgttacgta ttggtatctt taatttcaac
2761 agtgggtaaa ctggtttccc agtatacaat tcattgaaag caaaattgat taattatttc
2821 catttaattt atacacactc aatacaaaat ttaatgttga ctttacgtaa taaagtataa
2881 tg
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