LOCUS BC013961 1953 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens replication factor C (activator 1) 5, 36.5kDa, mRNA
(cDNA clone MGC:4451 IMAGE:2960023), complete cds.
ACCESSION BC013961
VERSION BC013961.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1953)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1953)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC013961.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: k Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31795539.
FEATURES Location/Qualifiers
source 1..1953
/db_xref="H-InvDB:HIT000036428"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4451 IMAGE:2960023"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1953
/gene="RFC5"
/gene_synonym="MGC1155"
/gene_synonym="RFC36"
/db_xref="GeneID:5985"
/db_xref="HGNC:HGNC:9973"
/db_xref="MIM:600407"
CDS 86..1108
/gene="RFC5"
/gene_synonym="MGC1155"
/gene_synonym="RFC36"
/codon_start=1
/product="replication factor C (activator 1) 5, 36.5kDa"
/protein_id="AAH13961.1"
/db_xref="GeneID:5985"
/db_xref="HGNC:HGNC:9973"
/db_xref="MIM:600407"
/translation="METSALKQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTI
QKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIR
GPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSK
IIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALN
ILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLA
LHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRD
LIVAEA"
BASE COUNT 572 a 420 c 441 g 520 t
ORIGIN
1 cagggtcagg tcgcggctgg tcactgtgca ggcgcttggg tgacgcgacg atctcagcgg
61 atctggtcac cttcgtctcc ccgccatgga gacctcagca ctcaagcagc aggagcagcc
121 cgcggcgacc aagatcagga acctgccctg ggttgaaaaa taccggccac agaccctgaa
181 tgatctcatt tctcatcagg acattctgag taccattcag aagtttatca atgaagaccg
241 actgccacac ttgcttctct acggtccccc agggacaggc aagacatcta ccatcctagc
301 ctgtgcgaaa cagctatata aagacaaaga atttggctcc atggtcttgg agctgaatgc
361 ttcagatgac cgaggaatag acatcattcg aggaccgatc ctgagctttg ctagcacaag
421 gacaatattt aagaaaggct ttaagctagt gatcttggat gaagcagacg ccatgactca
481 ggacgcccag aatgccttga gaagagtaat tgagaaattc acagaaaata ccagattctg
541 cctcatctgt aactatctgt caaagatcat ccctgccttg cagtcccgct gcacgaggtt
601 tcggttcggt cccctgactc ctgaactcat ggttccccgc ctggaacatg tcgtggaaga
661 agagaaagtt gatataagtg aagatggaat gaaagcacta gtcactcttt ccagtggaga
721 catgcgtagg gctctgaaca ttttgcagag caccaatatg gcctttggga aggtgacaga
781 ggagactgtc tacacctgca ccgggcaccc gctcaagtca gacattgcca acatcctgga
841 ctggatgttg aatcaagatt tcaccacagc ctacagaaat attacagagt tgaaaactct
901 gaaggggttg gcactgcatg atatcctgac agagatacac ttgtttgtgc atagagttga
961 ctttccatct tcagttcgaa tacatttatt gaccaaaatg gcagacattg agtacaggct
1021 ttctgttggc accaacgaga agatccagct gagctccctc attgctgcat ttcaagtcac
1081 cagagacctg attgttgcag aggcctagat gctctgaggg ccattcacaa ttctcagggc
1141 tcagcagtga tgggagaaca gaggacagtt ccaggataaa ctgctgcctg gggctgtggg
1201 atgaatcagt caccccgaat cttggaaaaa cccccttcca ggagaggatg ggcaggcatt
1261 taaaaagtac catttttgtg gttgtttgga gcagggatgt acaaaataat tttaatgtat
1321 taactcatac tgcctgtctt ttatagggga aaaaaataac cttttttatt ttaaagttat
1381 aaggttttta ccttttagtt gcttggatga cagggaatta gcctacccca ttttggtctg
1441 gaacagaaga ctttcaaatt taatatggtc caagtgtctt cctactcaag gtaaacatta
1501 tctccaaaat tacatttatg attctaatat ttggcattgt gtctgtatct aatttaaaca
1561 gatgttaatg gacgtctggc cgaaactatt atacttttat aagatgagct gaatcctctt
1621 actttaaaaa ctggtctttt tatttaccct ctgtggtaga agagtcacca gcaggttcca
1681 aattgatgtg tatgatagga aaaaaacctt aattttaaat ataatataga gccttaaact
1741 atgccactgg gtggcagagg ctgtataaaa cgcacttgtt ttcatgcagg agcggggcaa
1801 gtaaggttga gcctgactgt aaacctagaa ctgcggaagg actgggactt ttgtacaaat
1861 ttcacattta ttttacagca atcatgctgc atttgtgtta gtgttcttta taataaaaaa
1921 caaagcagcc tcctgaaaaa aaaaaaaaaa aaa
//