LOCUS BC013915 778 bp mRNA linear HUM 21-SEP-2006
DEFINITION Homo sapiens peptidylprolyl isomerase A (cyclophilin A), mRNA (cDNA
clone MGC:22814 IMAGE:3684721), complete cds.
ACCESSION BC013915
VERSION BC013915.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 778)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 778)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: b Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45439310.
FEATURES Location/Qualifiers
source 1..778
/db_xref="H-InvDB:HIT000036404"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22814 IMAGE:3684721"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..778
/gene="PPIA"
/gene_synonym="CYPA"
/gene_synonym="CYPH"
/gene_synonym="MGC12404"
/db_xref="GeneID:5478"
/db_xref="HGNC:HGNC:9253"
/db_xref="MIM:123840"
CDS 50..547
/gene="PPIA"
/gene_synonym="CYPA"
/gene_synonym="CYPH"
/gene_synonym="MGC12404"
/codon_start=1
/product="peptidylprolyl isomerase A (cyclophilin A)"
/protein_id="AAH13915.1"
/db_xref="GeneID:5478"
/db_xref="HGNC:HGNC:9253"
/db_xref="MIM:123840"
/translation="MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEK
GFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMAN
AGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD
CGQLE"
BASE COUNT 211 a 175 c 188 g 204 t
ORIGIN
1 ggggcgtttt gcagacgcca ccgccgagga aaaccgtgta ctattagcca tggtcaaccc
61 caccgtgttc ttcgacattg ccgtcgacgg cgagcccttg ggccgcgtct cctttgagct
121 gtttgcagac aaggtcccaa agacagcaga aaattttcgt gctctgagca ctggagagaa
181 aggatttggt tataagggtt cctgctttca cagaattatt ccagggttta tgtgtcaggg
241 tggtgacttc acacgccata atggcactgg tggcaagtcc atctatgggg agaaatttga
301 agatgagaac ttcatcctaa agcatacggg tcctggcatc ttgtccatgg caaatgctgg
361 acccaacaca aatggttccc agtttttcat ctgcactgcc aagactgagt ggttggatgg
421 caagcatgtg gtgtttggca aagtgaaaga aggcatgaat attgtggagg ccatggagcg
481 ctttgggtcc aggaatggca agaccagcaa gaagatcacc attgctgact gtggacaact
541 cgaataagtt tgacttgtgt tttatcttaa ccaccagatc attccttctg tagctcagga
601 gagcacccct ccaccccatt tgctcgcagt atcctagaat ctttgtgctc tcgctgcagt
661 tccctttggg ttccatgttt tccttgttcc ctcccatgcc tagctggatt gcagagttaa
721 gtttatgatt atgaaataaa aactaaatag caaaaaaaaa aaaaaaaaaa aaaaaaaa
//