LOCUS BC013744 1440 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 6 (granulocyte
chemotactic protein 2), mRNA (cDNA clone MGC:21713 IMAGE:4471095),
complete cds.
ACCESSION BC013744
VERSION BC013744.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1440)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1440)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: c Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851409.
FEATURES Location/Qualifiers
source 1..1440
/db_xref="H-InvDB:HIT000036346"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21713 IMAGE:4471095"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1440
/gene="CXCL6"
/gene_synonym="CKA-3"
/gene_synonym="GCP-2"
/gene_synonym="GCP2"
/db_xref="GeneID:6372"
/db_xref="HGNC:HGNC:10643"
/db_xref="MIM:138965"
CDS 31..375
/gene="CXCL6"
/gene_synonym="CKA-3"
/gene_synonym="GCP-2"
/gene_synonym="GCP2"
/codon_start=1
/product="chemokine (C-X-C motif) ligand 6 (granulocyte
chemotactic protein 2)"
/protein_id="AAH13744.1"
/db_xref="GeneID:6372"
/db_xref="HGNC:HGNC:10643"
/db_xref="MIM:138965"
/translation="MSLPSSRAARVPGPSGSLCALLALLLLLTPPGPLASAGPVSAVL
TELRCTCLRVTLRVNPKTIGKLQVFPAGPQCSKVEVVASLKNGKQVCLDPEAPFLKKV
IQKILDSGNKKN"
BASE COUNT 410 a 274 c 279 g 477 t
ORIGIN
1 caggaacccg cgaaccctct cttgaccact atgagcctcc cgtccagccg cgcggcccgt
61 gtcccgggtc cttcgggctc cttgtgcgcg ctgctcgcgc tgctgctcct gctgacgccg
121 ccggggcccc tcgccagcgc tggtcctgtc tctgctgtgc tgacagagct gcgttgcact
181 tgtttacgcg ttacgctgag agtaaacccc aaaacgattg gtaaactgca ggtgttcccc
241 gcaggcccgc agtgctccaa ggtggaagtg gtagcctccc tgaagaacgg gaagcaagtt
301 tgtctggacc cggaagcccc ttttctaaag aaagtcatcc agaaaatttt ggacagtgga
361 aacaagaaaa actgagtaac aaaaaagacc atgcatcata aaattgccca gtcttcagcg
421 gagcagtttt ctggagatcc ctggacccag taagaataag aaggaagggt tggttttttt
481 ccattttcta catggattcc ctactttgaa gagtgtgggg gaaagcctac gcttctccct
541 gaagtttaca gctcagctaa tgaagtacta atatagtatt tccactattt actgttattt
601 tacctgataa gttattgaac cctttggcaa ttgaccatat tgtgagcaaa gaatcactgg
661 ttattagtct ttcaatgaat attgaattga agataactat tgtatttcta tcatacattc
721 cttaaagtct taccgaaaag gctgtggatt tcgtatggaa ataatgtttt attagtgtgc
781 tgttgaggga ggtatcctgt tgttcttact cactcttctc ataaaatagg aaatatttta
841 gttctgtttc ttggggaata tgttactctt taccctagga tgctatttaa gttgtactgt
901 attagaacac tgggtgtgtc ataccgttat ctgtgcagaa tatatttcct tattcagaat
961 ttctaaaaat ttaagttctg taagggctaa tatattctct tcctatggtt ttagatgttt
1021 gatgtcttct tagtatggca taatgtcatg atttactcat taaactttga ttttgtatgc
1081 tattttttca ctataggatg actataattc tggtcactaa atatacactt tagatagatg
1141 aagaagccca aaaacagata aattcctgat tgctaattta catagaaatg tattctcttg
1201 gttttttaaa taaaagcaaa attaacaatg atctgtgctc tgaaagtttt gaaaatatat
1261 ttgaacaatt tgaatataaa ttcatcattt agtcctcaaa atatatacag cattgctaag
1321 attttcagat atctattgtg gatcttttaa aggttttgac cattttgtta tgaggaatta
1381 tacatgtatc acattcacta tattaaaatt gcacttttat ttttaaaaaa aaaaaaaaaa
//