LOCUS BC013735 3709 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens fucokinase, mRNA (cDNA clone IMAGE:4179554), partial cds. ACCESSION BC013735 VERSION BC013735.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3709) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3709) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: j Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 63175653. FEATURES Location/Qualifiers source 1..3709 /db_xref="H-InvDB:HIT000088159" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4179554" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..3709 /gene="FUK" /gene_synonym="1110046B12Rik" /gene_synonym="FLJ39408" /db_xref="GeneID:197258" /db_xref="HGNC:HGNC:29500" /db_xref="MIM:608675" CDS <1..3099 /gene="FUK" /gene_synonym="1110046B12Rik" /gene_synonym="FLJ39408" /codon_start=1 /product="FUK protein" /protein_id="AAH13735.1" /db_xref="GeneID:197258" /db_xref="HGNC:HGNC:29500" /db_xref="MIM:608675" /translation="RVGSGGATLNALLVAAEHLSARAGFTVVTSDVLHSAWILILHMG RDFPFDDCGRAFTCLPVENPEAPVEALVCNLDCLLDIMTYRLGPGSPPGVWVCSTDML LSVPANPGISWDSFRGARVIALPGSPAYAQNHGVYLTDPQGLVLDIYYQGTEAEIQRC VRPDGRVPLVSGVVFFSVETAERLLATHVSPPLDACTYLGLDSGARPVQLSLFFDILH CMAENVTREDFLVGRPPELGQGDADVAGYLQSARAQLWRELRDQPLTMAYVSSGSYSY MTSSASEFLLSLTLPGAPGAQIVHSQVEEQQLLAAGSSVVSCLLEGPVQLGPGSVLQH CHLQGPIHIGAGCLVTGLDTAHSKALHGRELRDLVLQGHHTRLHGSPGHAFTLVGRLD SWERQGAGTYLNVPWSEFFKRTGVRAWDLWDPETLPAEYCLPSARLFPVLHPSRELGP QDLLWMLDHQEDGGEALRAWRASWRLSWEQLQPCLDRAATLASRRDLFFRQALHKARH VLEARQDLSLRPLIWAAVREGCPGPLLATLDQVAAGAGDPGVAARALACVADVLGCMA EGRGGLRSGPAANPEWMRPFSYLECGDLAAGVEALAQERDKWLSRPALLVRAARHYEG AGQILIRQAVMSAQHFVSTEQVELPGPGQWVVAECPARVDFSGGWSDTPPLAYELGGA VLGLAVRVDGRRPIGARARRIPEPELWLAVGPRQDEMTVKIVCRCLADLRDYCQPHAP GALLKAAFICAGIVHVHSELQLSEQLLRTFGGGFELHTWSELPHGSGLGTSSILAGTA LAALQRAAGRVVGTEALIHAVLHLEQVLTTGGGWQDQVGGLMPGIKVGRSRAQLPLKV EVEEVTVPEGFVQKLNDHLLLVYTGKTRLARNLLQDVLRSWYARLPAVVQNAHSLVRQ TEECAEGFRQGSLPLLGQCLTSYWEQKKLMAPGCEPLTVRRMMDVLAPHVHGQSLAGA GGGGFLYLLTKEPQQKEALEAVLAKTEGLGNYSIHLVEVDTQGLSLKLLGTEASTCCP FP" BASE COUNT 633 a 1139 c 1215 g 722 t ORIGIN 1 cgtgtgggca gcggaggagc caccctcaac gccctgctgg tggctgctga acacctgagt 61 gcccgggcag gcttcactgt ggtcacatcc gatgtcctgc actcggcctg gatcctcatt 121 ctgcacatgg gtcgagactt cccctttgat gactgtggca gggctttcac ctgcctcccc 181 gtggagaacc ccgaggcccc cgtggaagcc ttggtctgca acctggactg cctgctggac 241 atcatgacct atcggctggg cccgggctcc ccgccaggcg tgtgggtctg cagcaccgac 301 atgctgctgt ctgttcctgc aaatcctggt atcagctggg acagcttccg gggagccaga 361 gtgatcgccc tcccagggag cccggcctac gctcagaatc atggcgtcta cctaactgac 421 ccccagggcc ttgttttgga catttactac cagggcactg aggcagagat tcagcggtgt 481 gtcaggcctg atgggcgggt gccactggtc tctggggttg tcttcttctc tgtggagact 541 gccgagcgcc tcctagccac ccacgtgagc ccgcccctgg atgcctgcac ctacctaggc 601 ttggactccg gagcccggcc tgtccagctg tctctgtttt ttgacattct ccactgcatg 661 gctgagaacg tgaccaggga ggacttcctg gtggggaggc ccccagagtt ggggcaaggc 721 gatgcagatg tagcgggtta tctgcagagc gcccgggccc agctgtggag ggagcttcgc 781 gatcagcccc ttaccatggc ctatgtctcc agcggcagct acagctacat gacctcctca 841 gccagtgagt tcctgctcag cctcacactc cccggggctc ctggggccca gattgtgcac 901 tcccaggtgg aggagcagca gcttctggcg gccgggagct ctgtggtcag ctgcctgctg 961 gagggccctg tccagctggg tcctgggagc gtcctgcagc actgccacct gcagggcccc 1021 attcacatag gcgctggctg cttggtgact ggcctggata cagcccactc caaggccctg 1081 catggccggg agctgcgtga ccttgtcctg cagggacacc acacgcggct acacggctcc 1141 ccgggccacg ccttcaccct cgttggccgt ctggacagct gggagagaca gggggcaggc 1201 acatatctca acgtgccctg gagtgaattc ttcaagagga caggtgttcg agcctgggac 1261 ctgtgggacc ccgagacgct gcccgcagag tactgccttc ccagcgcccg cctctttcct 1321 gtgctccacc cctcgaggga gctgggaccc caggacctgc tgtggatgct ggaccaccag 1381 gaggatgggg gcgaggccct gcgagcctgg cgggcctcct ggcgcctgtc ctgggagcag 1441 ctgcagccgt gcctggatcg ggctgccacg ctggcctctc gccgggacct gttcttccgc 1501 caggccctgc ataaggcgcg gcacgtgctg gaggcccggc aggacctcag cctgcgcccg 1561 ctgatctggg ctgctgtccg cgagggctgc cccgggcccc tgctggccac gctggaccag 1621 gttgcagctg gggcaggaga ccctggtgtg gcggcacggg cactggcctg tgtggcggac 1681 gtcctgggct gcatggcaga gggccgtggg ggcttgcgga gcgggccagc tgccaaccct 1741 gagtggatgc ggcccttctc atacctggag tgtggagacc tggcagcggg cgtggaggcg 1801 cttgcccagg agagggacaa gtggctaagc aggccagcct tgctggtgcg agcggcccgc 1861 cactatgagg gggctggtca gatcctgatc cgccaggctg tgatgtcagc ccagcacttt 1921 gtctccacag agcaggtgga actgccggga cctgggcagt gggtggtggc tgagtgcccg 1981 gcccgtgtgg atttctctgg gggctggagt gacacgccac cccttgccta tgagcttggc 2041 ggggctgtgc tgggcctggc tgtgcgagtg gacggccgcc ggcccatcgg agccagggca 2101 cgccgcatcc cggagcctga gctgtggctg gcggtggggc ctcggcagga tgagatgact 2161 gtgaagatag tgtgccggtg cctggctgac ctgcgggact actgccagcc tcatgcccca 2221 ggggccctgc tgaaggcggc cttcatctgt gcagggatcg tgcatgtcca ctcggaactc 2281 cagctgagtg agcagctgct ccgcaccttc gggggcggct ttgagctgca cacctggtct 2341 gagctgcccc acggctctgg cctgggcacc agcagcatcc tggcaggcac tgccctggct 2401 gccttgcagc gagccgcagg ccgggtggtg ggcacggaag ccctgatcca cgcagtgctg 2461 cacctggagc aggtgctcac cactggaggt ggctggcagg accaagtagg tggcctaatg 2521 cctggcatca aggtggggcg ctcccgggct cagctgccac tgaaggtgga ggtagaagag 2581 gtcacggtgc ctgagggctt tgtccagaag ctcaatgacc acctgctctt ggtgtacact 2641 ggcaagaccc gcctggctcg gaacctgctg caggatgtgc tgaggagctg gtatgcccga 2701 cttcctgctg tggtgcagaa tgcccacagc ctggtacggc aaactgagga gtgtgctgaa 2761 ggcttccgcc aaggaagcct gcctctgctg ggccagtgcc tgacctcgta ctgggagcag 2821 aagaagctca tggctccagg ctgtgagccc ctgactgtgc ggcgtatgat ggatgtcctg 2881 gccccccacg tgcatggcca gagcctggct ggggcaggcg gtggaggctt tctctatctg 2941 ttgaccaagg agccacagca aaaggaggcc ttggaggcgg tgctggccaa gaccgagggc 3001 cttgggaatt acagcatcca cctggttgaa gtggacactc agggcctgag cctgaagctg 3061 ctggggaccg aggcctcaac ctgttgccct ttcccatgaa gctggcttct ctctgcaaca 3121 ggagaaaacc tggagctaca gtgtccccca ccttccttgc cccatgggaa cctccacctc 3181 ctactcccca cccacctctg cgaatctgct cccaaaggaa gctgaccaga gcaagatctg 3241 ggcaagcaga gagtgcctgg gacaggactg tgacctggtg gacaggggcc tagatgtagc 3301 ctctgttcct cctggacata ggaaggtccc aagcttagta tcccacgtgg cctttacaaa 3361 tcctatggct ggccttctca ttccacaagg gccctggaaa gggttgacag ccagccttgg 3421 catatggctg ggagtccctt agcaaggcca accctgaaga ggccctttga ggcattccct 3481 atggcttaga gttgtagact tacactcaac cctcatgtga gcgtgggagt gagggtggcg 3541 gtcccttgcc aagttggtag cagtgaccca gtgattcact gccatcccag gccttaacta 3601 gcaaaactac ggagcgtgcc aagtgacctg gtgcctgtgg gaagtgggtt ctcaggactg 3661 gcattcttgg aataaattca ctctgtcctt gcaaaaaaaa aaaaaaaaa //