LOCUS BC013694 1917 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polypyrimidine tract binding protein 1, mRNA (cDNA
clone MGC:9838 IMAGE:3863892), complete cds.
ACCESSION BC013694
VERSION BC013694.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1917)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1917)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: i Column: 19.
FEATURES Location/Qualifiers
source 1..1917
/db_xref="H-InvDB:HIT000036329"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9838 IMAGE:3863892"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1917
/gene="PTBP1"
/gene_synonym="HNRNPI"
/gene_synonym="HNRPI"
/gene_synonym="MGC10830"
/gene_synonym="MGC8461"
/gene_synonym="pPTB"
/gene_synonym="PTB-1"
/gene_synonym="PTB-T"
/gene_synonym="PTB2"
/gene_synonym="PTB3"
/gene_synonym="PTB4"
/db_xref="GeneID:5725"
/db_xref="HGNC:HGNC:9583"
/db_xref="MIM:600693"
CDS 20..1693
/gene="PTBP1"
/gene_synonym="HNRNPI"
/gene_synonym="HNRPI"
/gene_synonym="MGC10830"
/gene_synonym="MGC8461"
/gene_synonym="pPTB"
/gene_synonym="PTB-1"
/gene_synonym="PTB-T"
/gene_synonym="PTB2"
/gene_synonym="PTB3"
/gene_synonym="PTB4"
/codon_start=1
/product="polypyrimidine tract binding protein 1"
/protein_id="AAH13694.1"
/db_xref="GeneID:5725"
/db_xref="HGNC:HGNC:9583"
/db_xref="MIM:600693"
/translation="MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDS
KKFKGDSRSAGVPSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMN
TEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSG
NLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTK
NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT
RPDLPSGDSQPSLDQTMAAAFGAPGIISASPYAGAGFPPTFAIPQAAGLSVPNVHGAL
APLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQR
VKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPREGQEDQ
GLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVK
GFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI"
BASE COUNT 460 a 609 c 501 g 347 t
ORIGIN
1 cgggtctgct ctgtgtgcca tggacggcat tgtcccagat atagccgttg gtacaaagcg
61 gggatctgac gagcttttct ctacttgtgt cactaacgga ccgtttatca tgagcagcaa
121 ctcggcttct gcagcaaacg gaaatgacag caagaagttc aaaggtgaca gccgaagtgc
181 aggcgtcccc tctagagtga tccacatccg gaagctcccc atcgacgtca cggaggggga
241 agtcatctcc ctggggctgc cctttgggaa ggtcaccaac ctcctgatgc tgaaggggaa
301 aaaccaggcc ttcatcgaga tgaacacgga ggaggctgcc aacaccatgg tgaactacta
361 cacctcggtg acccctgtgc tgcgcggcca gcccatctac atccagttct ccaaccacaa
421 ggagctgaag accgacagct ctcccaacca ggcgcgggcc caggcggccc tgcaggcggt
481 gaactcggtc cagtcgggga acctggcctt ggctgcctcg gcggcggccg tggacgcagg
541 gatggcgatg gccgggcaga gccccgtgct caggatcatc gtggagaacc tcttctaccc
601 tgtgaccctg gatgtgctgc accagatttt ctccaagttc ggcacagtgt tgaagatcat
661 caccttcacc aagaacaacc agttccaggc cctgctgcag tatgcggacc ccgtgagcgc
721 ccagcacgcc aagctgtcgc tggacgggca gaacatctac aacgcctgct gcacgctgcg
781 catcgacttt tccaagctca ccagcctcaa cgtcaagtac aacaatgaca agagccgtga
841 ctacacacgc ccagacctgc cttccgggga cagccagccc tcgctggacc agaccatggc
901 cgcggccttc ggtgcacctg gtataatctc agcctctccg tatgcaggag ctggtttccc
961 tcccaccttt gccattcctc aagctgcagg cctttccgtt ccgaacgtcc acggcgccct
1021 ggcccccctg gccatcccct cggcggcggc ggcagctgcg gcggcaggtc ggatcgccat
1081 cccgggcctg gcgggggcag gaaattctgt attgctggtc agcaacctca acccagagag
1141 agtcacaccc caaagcctct ttattctttt cggcgtctac ggtgacgtgc agcgcgtgaa
1201 gatcctgttc aataagaagg agaacgccct agtgcagatg gcggacggca accaggccca
1261 gctggccatg agccacctga acgggcacaa gctgcacggg aagcccatcc gcatcacgct
1321 ctcgaagcac cagaacgtgc agctgccccg cgagggccag gaggaccagg gcctgaccaa
1381 ggactacggc aactcacccc tgcaccgctt caagaagccg ggctccaaga acttccagaa
1441 catattcccg ccctcggcca cgctgcacct ctccaacatc ccgccctcag tctccgagga
1501 ggatctcaag gtcctgtttt ccagcaatgg gggcgtcgtc aaaggattca agttcttcca
1561 gaaggaccgc aagatggcac tgatccagat gggctccgtg gaggaggcgg tccaggccct
1621 cattgacctg cacaaccacg acctcgggga gaaccaccac ctgcgggtct ccttctccaa
1681 gtccaccatc taggggcaca ggcccccacg gccgggcccc ctggcgacaa cttccatcat
1741 tccagagaaa agccacttta aaaacagctg aagtgacctt agcagaccag agattttatt
1801 tttttaaaga gaaatcagtt tacctgtttt taaaaaaatt aaatctagtt caccttgctc
1861 accctgcggt gacagggaca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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