LOCUS BC013674 1317 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:17324
IMAGE:4152521), complete cds.
ACCESSION BC013674
VERSION BC013674.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1317)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1317)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1317
/db_xref="H-InvDB:HIT000036320"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17324 IMAGE:4152521"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1317
/gene="RPL3"
/gene_synonym="TARBP-B"
/db_xref="GeneID:6122"
/db_xref="HGNC:HGNC:10332"
/db_xref="MIM:604163"
CDS 10..1221
/gene="RPL3"
/gene_synonym="TARBP-B"
/codon_start=1
/product="ribosomal protein L3"
/protein_id="AAH13674.1"
/db_xref="GeneID:6122"
/db_xref="HGNC:HGNC:10332"
/db_xref="MIM:604163"
/translation="MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLT
AFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTF
KTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVI
RVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMID
VIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHH
RTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLK
GCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPL
KKDRIAKEEGA"
BASE COUNT 373 a 316 c 377 g 251 t
ORIGIN
1 gatggcgtga tgtctcacag aaagttctcc gctcccagac atgggtccct cggcttcctg
61 cctcggaagc gcagcagcag gcatcgtggg aaggtgaaga gcttccctaa ggatgacccg
121 tccaagccgg tccacctcac agccttcctg ggatacaagg ctggcatgac tcacatcgtg
181 cgggaagtcg acaggccggg atccaaggtg aacaagaagg aggtggtgga ggctgtgacc
241 attgtagaga caccacccat ggtggttgtg ggcattgtgg gctacgtgga aacccctcga
301 ggcctccgga ccttcaagac tgtctttgct gagcacatca gtgatgaatg caagaggcgt
361 ttctataaga attggcataa atctaagaag aaggccttta ccaagtactg caagaaatgg
421 caggatgagg atggcaagaa gcagctggag aaggacttca gcagcatgaa gaagtactgc
481 caagtcatcc gtgtcattgc ccacacccag atgcgcctgc ttcctctgcg ccagaagaag
541 gcccacctga tggagatcca ggtgaacgga ggcactgtgg ccgagaagct ggactgggcc
601 cgcgagaggc ttgagcagca ggtacctgtg aaccaagtgt ttgggcagga tgagatgatc
661 gacgtcatcg gggtgaccaa gggcaaaggc tacaaagggg tcaccagtcg ttggcacacc
721 aagaagctgc cccgcaagac ccaccgaggc ctgcgcaagg tggcctgtat tggggcatgg
781 catcctgctc gtgtagcctt ctctgtggca cgcgctgggc agaaaggcta ccatcaccgc
841 actgagatca acaagaagat ttataagatt ggccagggct accttatcaa ggacggcaag
901 ctgatcaaga acaatgcctc cactgactat gacctatctg acaagagcat caaccctctg
961 ggtggctttg tccactatgg tgaagtgacc aatgactttg tcatgctgaa aggctgtgtg
1021 gtgggaacca agaagcgggt gctcaccctc cgcaagtcct tgctggtgca gacgaagcgg
1081 cgggctctgg agaagattga ccttaagttc attgacacca cctccaagtt tggccatggc
1141 cgcttccaga ccatggagga gaagaaagca ttcatgggac cactgaagaa agaccgaatt
1201 gcaaaggaag aaggagctta atgccaggaa cagattttgc agttggtggg gtctcaataa
1261 aagttatttt ccactgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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