LOCUS BC013658 1102 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens collagen, type XX, alpha 1, mRNA (cDNA clone IMAGE:4153348), partial cds. ACCESSION BC013658 VERSION BC013658.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1102) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1102) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: d Column: 6. FEATURES Location/Qualifiers source 1..1102 /db_xref="H-InvDB:HIT000088146" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4153348" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1102 /gene="COL20A1" /gene_synonym="bA261N11.4" /gene_synonym="KIAA1510" /db_xref="GeneID:57642" CDS <1..838 /gene="COL20A1" /gene_synonym="bA261N11.4" /gene_synonym="KIAA1510" /codon_start=2 /product="COL20A1 protein" /protein_id="AAH13658.1" /db_xref="GeneID:57642" /translation="LAKARGPRSSSAAFQLQMLQIVCSDTWADEDRCCELPASRDGET CPAFVSACSCSSETPGPPGPQGPPGLPGRNGTPGEQGFPGPRGPPGVKGEKGDHGLPG LQGHPGHQGIPGRVGLQGPKGMRGLEGTAGLPGPPGPRGFQGMAGARGTSGERGPPGT VGPTGLPGPKGERGEKGEPQSLATLYQLVSQACESAIQTHVSKFDSFHENTRPPMPIL EQKLEPGTEPLGSPGTRSKALVPGEWGRGGRHLEGRGEPGAVGQMGSPGQQGASTQGL WE" BASE COUNT 256 a 331 c 359 g 156 t ORIGIN 1 gctggccaag gccaggggcc cccggagcag ttcggccgcg tttcagctcc agatgctgca 61 gatcgtgtgc agtgacacct gggccgatga ggaccggtgc tgtgagctcc ctgcctcgag 121 ggatggagag acctgccccg ccttcgtgtc tgcctgttcc tgttcctcag agacccctgg 181 gcccccagga cctcaaggac ccccaggcct ccctgggagg aatggcaccc caggagagca 241 gggcttccca gggcccaggg gtccaccagg ggtcaaagga gagaagggag accatgggct 301 tccaggcttg cagggccacc ccggccacca gggcatcccc gggagagttg gcctccaggg 361 accaaaggga atgagaggcc tggagggaac tgctggcctg cctggacccc ctggccccag 421 ggggttccag ggcatggcag gggccagggg cactagtgga gagcgaggac ctccagggac 481 cgtggggccc acaggactgc cagggcccaa aggggaacga ggagagaagg gcgagccgca 541 gtcccttgcc accctctacc agcttgtgag ccaggcctgt gagtctgcca ttcagacaca 601 cgtgtcaaag ttcgactcct tccacgagaa caccaggccc cccatgccca tcttggagca 661 gaagctggag ccgggcactg agcccctggg gtcccctggc acccgcagca aggccctggt 721 tcctggagaa tgggggcgtg gtggccgcca ccttgagggc agaggggagc ctggagctgt 781 tggtcagatg ggcagccctg ggcagcaggg ggctagcacc cagggcctct gggagtgaca 841 ggacattttc tgcactgccc cgaggaacgc tgagccttcc tccctgggtt tgtctggaca 901 ccgagagcga ccacatcctg gagaagccag gagaaaagct caggaagagc ctgcaggtgg 961 aaggagaggg aagcagcggc ctcggccaag gcccacccca tactcttggc tctgtagcat 1021 ttccaagttc agataaaccc ctgagtgctc acccaaaaaa aaaaaaaaaa aaaaaaaaaa 1081 aaaaaaaaaa aaaaaaaaaa aa //