LOCUS BC013643 860 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 5 open reading frame 32, mRNA (cDNA clone
MGC:18101 IMAGE:4152168), complete cds.
ACCESSION BC013643
VERSION BC013643.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 860)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 860)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: g Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543361.
FEATURES Location/Qualifiers
source 1..860
/db_xref="H-InvDB:HIT000036312"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:18101 IMAGE:4152168"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..860
/gene="C5orf32"
/gene_synonym="ORF1-FL49"
/db_xref="GeneID:84418"
/db_xref="HGNC:HGNC:30239"
CDS 149..442
/gene="C5orf32"
/gene_synonym="ORF1-FL49"
/codon_start=1
/product="chromosome 5 open reading frame 32"
/protein_id="AAH13643.1"
/db_xref="GeneID:84418"
/db_xref="HGNC:HGNC:30239"
/translation="MNQENPPPYPGPGPTAPYPPYPPQPMGPGPMGGPYPPPQGYPYQ
GYPQYGWQGGPQEPPKTTVYVVEDQRRDELGPSTCLTACWTALCCCCLWDMLT"
BASE COUNT 236 a 234 c 184 g 206 t
ORIGIN
1 gccgtgacgt caggcgcccg gctgctcctc acttgctctg agacaggtgc ggcaagtcta
61 ctgcgggctg gtccgggctc ctcaggttca gacccgaccg ttatccagtc ggttcgtgga
121 gaggagaggt gcactttaca ggtccccgat gaaccaagag aaccctccac catatccagg
181 ccctggtcca acggccccat acccacctta tccaccacaa ccaatgggtc caggacctat
241 ggggggaccc tacccacctc ctcaagggta cccctaccaa ggatacccac agtacggctg
301 gcagggtgga cctcaggagc ctcctaaaac cacagtgtat gtggtagaag accaaagaag
361 agatgagcta ggaccatcca cctgcctcac agcctgctgg acggctctct gttgctgctg
421 tctctgggac atgctcacct gaccagacca gcccagccgt cctgtcctgc cagctctgct
481 gccacctctg acaggtgtgc ctgcccccat ctcttctgat tgctgttaac aaatgactag
541 ctttgcacag acacctctac cttcagcact atgggattct agattaatgg gggttgctac
601 tgtttaattc agtgacttga tctttttaat gtccaaaatc catttcttat tgatctttaa
661 agatgtgcta aatgactttt ttggccaaag gcttagttgt gaaaaatata atttttaaat
721 tatacattca aggtagtggc caaatgtaac acatcaatca tggaatgatt tctctgctaa
781 cagccgcctg tatgtttcaa taaatttgtc caaagctcca aaaaaaaaaa aaaaaaaaaa
841 aaaaaaaaaa aaaaaaaaag
//