LOCUS BC013596 3041 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens glial fibrillary acidic protein, mRNA (cDNA clone MGC:17031 IMAGE:4185584), complete cds. ACCESSION BC013596 VERSION BC013596.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3041) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3041) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: m Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24430142. FEATURES Location/Qualifiers source 1..3041 /db_xref="H-InvDB:HIT000036299" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17031 IMAGE:4185584" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3041 /gene="GFAP" /db_xref="GeneID:2670" /db_xref="HGNC:HGNC:4235" /db_xref="MIM:137780" CDS 3..1301 /gene="GFAP" /codon_start=1 /product="glial fibrillary acidic protein" /protein_id="AAH13596.1" /db_xref="GeneID:2670" /db_xref="HGNC:HGNC:4235" /db_xref="MIM:137780" /translation="MERRRITSAARRSYVSSGEMMVGGLAPGRRLGPGTRLSLARMPP PLPTRVDFSLAGALNAGFKETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELN QLRAKEPTKLADVYQAELRELRLRLDQLTANSARLEVERDNLAQDLATVRQKLQDETN LRLEAENNLAAYRQEADEATLARLDLERKIESLEEEIRFLRKIHEEEVRELQEQLARQ QVHVELDVAKPDLTAALKEIRTQYEAMASSNMHEAEEWYRSKFADLTDAAARNAELLR QAKHEANDYRRQLQSLTCDLESLRGTNESLERQMREQEERHVREAASYQEALARLEEE GQSLKDEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEENRITIPVQTFSNLQIRET SLDTKSVSEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM" BASE COUNT 679 a 865 c 925 g 572 t ORIGIN 1 ggatggagag gagacgcatc acctccgctg ctcgccgctc ctacgtctcc tcaggggaga 61 tgatggtggg gggcctggct cctggccgcc gtctgggtcc tggcacccgc ctctccctgg 121 ctcgaatgcc ccctccactc ccgacccggg tggatttctc cctggctggg gcactcaatg 181 ctggcttcaa ggagacccgg gccagtgagc gggcagagat gatggagctc aatgaccgct 241 ttgccagcta catcgagaag gttcgcttcc tggaacagca aaacaaggcg ctggctgctg 301 agctgaacca gctgcgggcc aaggagccca ccaagctggc agacgtctac caggctgagc 361 tgcgagagct gcggctgcgg ctcgatcaac tcaccgccaa cagcgcccgg ctggaggttg 421 agagggacaa tctggcacag gacctggcca ctgtgaggca gaagctccag gatgaaacca 481 acctgaggct ggaagccgag aacaacctgg ctgcctatag acaggaagca gatgaagcca 541 ccctggcccg tctggatctg gagaggaaga ttgagtcgct ggaggaggag atccggttct 601 tgaggaagat ccacgaggag gaggttcggg aactccagga gcagctggcc cgacagcagg 661 tccatgtgga gcttgacgtg gccaagccag acctcaccgc agccctgaaa gagatccgca 721 cgcagtatga ggcaatggcg tccagcaaca tgcatgaagc cgaagagtgg taccgctcca 781 agtttgcaga cctgacagac gctgctgccc gcaacgcgga gctgctccgc caggccaagc 841 acgaagccaa cgactaccgg cgccagttgc agtccttgac ctgcgacctg gagtctctgc 901 gcggcacgaa cgagtccctg gagaggcaga tgcgcgagca ggaggagcgg cacgtgcggg 961 aggcggccag ttatcaggag gcgctggcgc ggctggagga agaggggcag agcctcaagg 1021 acgagatggc ccgccacttg caggagtacc aggacctgct caatgtcaag ctggccctgg 1081 acatcgagat cgccacctac aggaagctgc tagagggcga ggagaaccgg atcaccattc 1141 ccgtgcagac cttctccaac ctgcagattc gagaaaccag cctggacacc aagtctgtgt 1201 cagaaggcca cctcaagagg aacatcgtgg tgaagaccgt ggagatgcgg gatggagagg 1261 tcattaagga gtccaagcag gagcacaagg atgtgatgtg aggcaggacc cacctggtgg 1321 cctctgccgc gtctcatgag gggcccgagc agaagcagga tagttgctcc gcctctgctg 1381 gcacatttcc ccagacctga gctccccacc accccagctg ctcccctccc tcctctgtcc 1441 ctaggtcagc ttgctgccct aggctccgtc agtatcaggc ctgccagacg gcacccaccc 1501 agcacccagc aactccaact aacaagaaac tcacccccaa ggggcagtct ggaggggcat 1561 ggccagcagc ttgcgttaga atgaggagga aggagagaag gggaggaggg cggggggcac 1621 ctactacatc gccctccaca tccctgattc ctgttgttat ggaaactgtt gccagagatg 1681 gaggttctct cggagtatct gggaactgtg cctttgagtt tcctcaggct gctggaggaa 1741 aactgagact cagacaggaa agggaaggcc ccacagacaa ggtagccctg gccagaggct 1801 tgttttgtct tttggttttt atgaggtggg atatccctat gctgcctagg ctgaccttga 1861 actcctgggc tcaagcagtc tacccacctc agcctcctgt gtagctggga ttatagattg 1921 gagccaccat gcccagctca gagggttgtt ctcctagact gaccctgatc agtctaagat 1981 gggtggggac gtcctgccac ctggggcagt cacctgccca gatcccagaa ggacctcctg 2041 agcgatgact caagtgtctc agtccacctg agctgccatc cagggatgcc atctgtgggc 2101 acgctgtggg caggagggag cttgattctc agcacttggg ggatctgttg tgtacgtgga 2161 gagggatgag gtgctgggag ggatagaggg gggctgcctg gcccccagct gtgggtacag 2221 agaggtcaag cccaggagga ctgccccgtg cagactggag gggacgctgg tagagatgga 2281 ggaggaggca attgggatgg cgctaggcat acaagtaggg gttgtgggtg accagttgca 2341 cttggcctct ggattgtggg aattaaggaa gtgactcatc ctcttgaaga tgctgaaaca 2401 ggagagaaag gggatgtatc catgggggca gggcatgact ttgtcccatt tctaaaggcc 2461 tcttccttgc tgtgtcatac caggccgccc cagcctctga gcccctggga ctgctgcttc 2521 ttaaccccag taagccactg ccacacgtct gaccctctcc accccatagt gaccggctgc 2581 ttttccctaa gccaagggcc tcttgcggtc ccttcttact cacacacaaa atgtacccag 2641 tattctaggt agtgccctat tttacaattg taaaactgag gcacgagcaa agtgaagaca 2701 ctggctcata ttcctgcagc ctggaggccg ggtgctcagg gctgacacgt ccaccccagt 2761 gcacccactc tgctttgact gagcagactg gtgagcagac tggtgggatc tgtgcccaga 2821 gacgggactg ggagggccca cttcagggtt ctcctctccc ctctaaggcc gaagaagggt 2881 ccttccctct ccccaagact tggtgtcctt tccctccact ccttcctgcc acctgctgct 2941 gctgctgctg ctaatcttca gggcactgct gctgccttta gtcgctgagg aaaaataaag 3001 acaaatgctg cgcccttaaa aaaaaaaaaa aaaaaaaaaa a //