LOCUS BC013568 2380 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
V, mRNA (cDNA clone MGC:8856 IMAGE:3890907), complete cds.
ACCESSION BC013568
VERSION BC013568.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2380)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2380)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: e Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361770.
FEATURES Location/Qualifiers
source 1..2380
/db_xref="H-InvDB:HIT000036278"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8856 IMAGE:3890907"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2380
/gene="PIGV"
/gene_synonym="FLJ20477"
/gene_synonym="RP1-50O24.2"
/db_xref="GeneID:55650"
/db_xref="HGNC:HGNC:26031"
CDS 332..1813
/gene="PIGV"
/gene_synonym="FLJ20477"
/gene_synonym="RP1-50O24.2"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class V"
/protein_id="AAH13568.1"
/db_xref="GeneID:55650"
/db_xref="HGNC:HGNC:26031"
/translation="MWPQDPSRKEVLRFAVSCRILTLMLQALFNAIIPDHHAEAFSPP
RLAPSGFVDQLVEGLLGGLSHWDAEHFLFIAEHGYLYEHNFAFFPGFPLALLVGTELL
RPLRGLLSLRSCLLISVASLNFLFFMLAAVALHDLGCLVLHCPHQSFYAALLFCLSPA
NVFLAAGYSEALFALLTFSAMGQLERGRVWTSVLLFAFATGVRSNGLVSVGFLMHSQC
QGFFSSLTMLNPLRQLFKLMASLFLSVFTLGLPFALFQYYAYTQFCLPGSARPIPEPL
VQLAVDKGYRIAEGNEPPWCFWDVPLIYSYIQDVYWNVGFLKYYELKQVPNFLLAAPV
AILVAWATWTYVTTHPWLCLTLGLQRSKNNKTLEKPDLGFLSPQVFVYVVHAAVLLLF
GGLCMHVQVLTRFLGSSTPIMYWFPAHLLQDQEPLLRSLKTVPWKPLAEDSPPGQKVP
RNPIMGLLYHWKTCSPVTRYILGYFLTYWLLGLLLHCNFLPWT"
BASE COUNT 500 a 627 c 584 g 669 t
ORIGIN
1 gtccccgccg gggaggtcgg gacgggcagg ggctgaggac cccgcgccag cttgggagcc
61 ctggagttct ggcgggaggg aagctgtcaa atggaagccg gtagaaatga gacagacgcc
121 cggagaagcg gggagccccg cccctccgcc atagcagcct cgggcgccgc ctcttccttt
181 ccagcctccc gccctcgtct gcttccggcc ctgtggcctg gtggggctct gcaggctccc
241 tcgggagtgg tccttgggcc gtggcccctc tgggaggcct gagggagctc aatcctggta
301 gcaacacccc tgaattcctg gtggtgaaag gatgtggccc caggacccat cccggaagga
361 ggtgctgagg tttgcagtca gctgccgtat cctgactctg atgctgcagg ccctcttcaa
421 tgccatcatc ccagatcacc atgcagaagc cttctctcct cctcgcctgg ccccctcagg
481 ctttgtggac caactcgtgg aaggtcttct gggcggcctg tctcactggg atgctgaaca
541 cttcttgttc attgctgagc atggctacct gtatgagcac aactttgcct tctttcctgg
601 tttccccttg gccctgctgg tggggactga actgttgaga cccttacggg ggttactgag
661 tctacgcagt tgcctgctga tttcggtagc atcactcaat ttcttgttct tcatgttggc
721 tgcagttgca cttcatgacc tgggttgtct ggttttgcac tgtccccacc agtcctttta
781 tgcagctctg cttttctgtc tcagccctgc caatgtcttc ctggcagctg gttactcaga
841 agctttgttt gccctcctga cattcagtgc catggggcag ctggagaggg gccgagtctg
901 gactagtgta ctcctctttg cctttgccac tggggtacgc tccaacgggc tggtcagtgt
961 tggcttcctc atgcattctc aatgccaagg ctttttctct tctctaacga tgctgaatcc
1021 tctgagacag ctctttaagc tgatggcctc tctgtttctg tcggtgttca cacttggcct
1081 tccctttgcc ctctttcagt attatgccta cacccaattc tgtctgccag gctcagcccg
1141 ccccattcct gagcctttgg tacagttagc tgtagacaag ggctaccgga ttgcagaggg
1201 aaatgaaccg ccttggtgct tctgggatgt tccactaata tacagctata tccaggatgt
1261 ctactggaat gttggctttt tgaaatacta tgagctcaag caggtgccca attttctact
1321 ggctgcacca gtggctatac tggttgcctg ggcaacttgg acatacgtga ccactcaccc
1381 ttggctctgc cttacacttg ggctgcaaag gagcaagaac aataagaccc tagagaagcc
1441 cgatcttgga ttcctcagtc ctcaggtgtt tgtgtacgtg gtccacgctg cagtgctgct
1501 gctgtttgga ggtctgtgca tgcatgttca ggttctcacc aggtttttgg gctcctccac
1561 tcctattatg tactggtttc cagctcactt gcttcaggat caagagccgc tgttgagatc
1621 cttaaagact gtgccttgga agcctcttgc agaggactcc ccaccaggac aaaaggtccc
1681 cagaaatcct atcatgggac ttttgtatca ctggaaaacc tgttctccag tcacacgata
1741 cattctaggc tacttcctga cttactggct cctgggacta ctcctacatt gcaacttcct
1801 gccttggaca tgacctggac tctccaggga caggttggaa gccaacttaa cccaggggtc
1861 tgaaagtaaa aatacacatt ggaactgcct ctgctgccct gggatcatta ctgtgtccat
1921 tataatcttt ctctttctct ttgaaagctg gtcaggaatg ggagaagtgt cagacactag
1981 agagcccctt ctggtcctgg ctagggcaaa ttttagacaa ctattttctc tgtaagtgaa
2041 gattgtcgta ttccaagtct aaaatacacc tggatctgtc tagtcaatca acatagcaga
2101 gacagtctta aacctaccat tgacctgtgt gtaaatttaa atgtcaattt attgaagtgt
2161 aaatttcatc aaaggcatta gctgacaggc tggtaacagt ccacacaaga tggtataggc
2221 ctgaacagtg tagtggcagt aataaagtgg gaccattttt tccaaatgcg acattgtttc
2281 tgatgttttt ttttatgatt tgtgcatgta tttttatatg aaaaaaactt acaaagatat
2341 gcaaattaaa cttctttcag ttataaaaaa aaaaaaaaaa
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