LOCUS BC013425 1578 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens ubiquitin-like domain containing
CTD phosphatase 1, mRNA (cDNA clone MGC:10067 IMAGE:3894780),
complete cds.
ACCESSION BC013425
VERSION BC013425.2
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 1578)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1578)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC013425.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: g Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450801.
FEATURES Location/Qualifiers
source 1..1578
/db_xref="H-InvDB:HIT000036267"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Lung, carcinoma, large
cell undifferentiated."
/db_xref="taxon:32630"
/clone="MGC:10067 IMAGE:3894780"
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1578
/gene="UBLCP1"
/gene_synonym="CPUB1"
/gene_synonym="FLJ25267"
/gene_synonym="MGC10067"
/db_xref="GeneID:134510"
/db_xref="HGNC:HGNC:28110"
/db_xref="MIM:609867"
CDS 139..1095
/gene="UBLCP1"
/gene_synonym="CPUB1"
/gene_synonym="FLJ25267"
/gene_synonym="MGC10067"
/codon_start=1
/transl_table=11
/product="ubiquitin-like domain containing CTD phosphatase
1"
/protein_id="AAH13425.2"
/db_xref="GeneID:134510"
/db_xref="HGNC:HGNC:28110"
/db_xref="MIM:609867"
/translation="MALPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQK
LLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREESLEDVLGPPPDNDDVVNDFDIE
DEVVEVENREENLLKISRRVKEYKVEILNPPREGKKLLVLDVDYTLFDHRSCAETGVE
LMRPYLHEFLTSAYEDYDIVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMIT
VHTPRRGLIDVKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHL
NRDKDKELLKLTQYLKEIAKLDDFLDLNHKYWERYLSKKQGQ"
BASE COUNT 527 a 293 c 311 g 447 t
ORIGIN
1 cccacgcgtc cgcggacgcg tgggtccggt cgctttcggt ctctcagcgg ccggtttctg
61 cgtccgctgc cgcaggttcc accgcgctcc aggtattttt ttttctgaag gaaagctgct
121 tcctcatatg tttcaagaat ggctctccct atcattgtaa aatggggtgg acaggagtat
181 tcagtgacca cactttcaga agatgatact gtgctcgatc tcaaacagtt tctcaagacc
241 cttacaggag ttcttccaga acgccaaaag ttacttggac tcaaagttaa aggcaaacct
301 gcagaaaatg atgttaagct tggagctctc aaactgaaac caaatactaa aatcatgatg
361 atgggaactc gtgaggagag cttggaagat gtcttaggtc caccccctga caatgatgat
421 gttgttaatg actttgatat tgaagatgaa gtagttgaag tagaaaatag ggaagaaaac
481 ctactgaaaa tttctcgcag agtgaaagag tacaaagtgg aaattttgaa tcctcccagg
541 gaagggaaaa agcttttggt gctagatgtt gattatacat tatttgacca caggtcttgt
601 gcagagactg gggtagaatt aatgcggcca tatcttcatg aatttctaac atctgcctat
661 gaagattatg acattgttat ttggtctgca acaaatatga agtggattga agctaaaatg
721 aaagagctgg gagtgagcac aaatgcaaat tataagatta ctttcatgtt ggatagtgct
781 gctatgataa cagtacatac tccaaggaga ggattaatag acgtaaagcc tcttggtgtt
841 atatggggaa agttttcgga gttttacagc aagaaaaaca ccattatgtt tgatgacata
901 gggagaaatt ttctaatgaa cccacagaat ggactaaaga taaggccttt tatgaaagcg
961 cacctaaatc gtgataaaga caaagaactt ttaaaattaa ctcagtacct caaggagata
1021 gcaaaattag atgacttttt ggatctaaat cacaaatatt gggaaagata tctctcaaag
1081 aagcaaggac agtagttaca agttatactg gcagttattg aagatactta agatccaaga
1141 acttcttgct tttatgctag aaatcattat gatagtgctg gacactgaag caaataccat
1201 actgcttata cttggtcttc cagttttttg taaatttaat tttatatttt ttgaagatga
1261 tagcaatatg ctaaaaaatg cttgtcccct atatgaatat tctgttacgc ttgaaaaata
1321 ttttctccag cgttggttac tgaccacccc accctcccac cacacacaca cacacacaca
1381 cacacacaca cacacacaca cacacaaagt ggagaaaaat gtatactcaa caatgtcatt
1441 ttgtgacttt ggaaacaagt tatgttttgt gtttttgtct cattgtgtta ttgtctgact
1501 aaatctaaaa ccaaacccat gttgaaacta gtacttttcc ctttaaaaac aaaccaaaaa
1561 aaaaaacaaa aaaaaaaa
//