LOCUS BC013409 1170 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens SAP30 binding protein, mRNA (cDNA clone
IMAGE:3028192), partial cds.
ACCESSION BC013409
VERSION BC013409.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1170)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1170)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC013409.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: l Column: 2.
FEATURES Location/Qualifiers
source 1..1170
/db_xref="H-InvDB:HIT000088116"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3028192"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1170
/gene="SAP30BP"
/gene_synonym="HCNGP"
/gene_synonym="HTRG"
/gene_synonym="HTRP"
/db_xref="GeneID:29115"
/db_xref="HGNC:HGNC:30785"
/db_xref="IMGT/GENE-DB:30785"
/db_xref="MIM:30785"
CDS <1..914
/gene="SAP30BP"
/gene_synonym="HCNGP"
/gene_synonym="HTRG"
/gene_synonym="HTRP"
/codon_start=3
/product="SAP30BP protein"
/protein_id="AAH13409.2"
/db_xref="GeneID:29115"
/db_xref="HGNC:HGNC:30785"
/db_xref="IMGT/GENE-DB:30785"
/db_xref="MIM:30785"
/translation="NVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGED
DFSRLGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPKNNTEAEKRDPQELVASFSE
RVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIY
EKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKERTKIEF
VTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPAV
VTVTTSASGSKTTVISAVGTIVKKAKQ"
BASE COUNT 353 a 289 c 313 g 215 t
ORIGIN
1 agaatgttct gtcgtctctc gcagtttacg cggaagattc agagcccgag tctgatggcg
61 aggctggaat cgaggcggtg ggcagcgcgg ctgaggagaa aggcggattg gtatctgatg
121 cctatgggga ggatgacttt tctcgtctag ggggtgatga agatggttat gaagaagaag
181 aagatgagaa cagtagacag tcggaagatg acgattcaga gactgaaaaa cctgaggctg
241 atgacccaaa gaataataca gaagcagaaa agcgagaccc ccaggaactc gtggcctcct
301 tttctgaaag agttcggaac atgtcgcctg atgaaatcaa gatcccgcca gaaccccctg
361 gcagatgttc aaatcacttg caagacaaga tccagaagct ttatgaacga aagataaagg
421 agggaatgga tatgaactac attatccaaa ggaagaaaga atttcggaac cctagcatct
481 acgagaagct gatccagttc tgtgccattg acgagcttgg caccaactac ccaaaggata
541 tgtttgatcc ccatggctgg tctgaggact cctactatga ggcattagcc aaggcccaga
601 aaattgagat ggacaaattg gaaaaggcca aaaaggagcg aacaaaaatt gagtttgtga
661 cgggcaccaa aaaaggcacc acgaccaacg ccacgtccac caccactacc actgccagca
721 cagctgttgc agatgctcag aagagaaaga gcaagtggga ttcggctatc ccagtgacaa
781 cgatagccca gcccaccatc ctcaccacca cagccaccct gccagctgtt gtcacggtca
841 ccaccagcgc cagcggctcc aagaccaccg tcatctctgc tgtgggcacc attgtgaaga
901 aggccaagca gtgacctgag gggccaccct aggacttgaa aggaccgtgc agcccagtga
961 ccactgccca gtgggaggcg ccactttgta tatttcagga ctgggaccta ctccccagat
1021 gccacctgag aggagcttct gtttggcatt ccagatggaa ggacaggcag cacgggagcc
1081 aggcgctgtg gacagggtct gtccacgcac cacctggggt ctgccgccta ttaaaagtgc
1141 cgtattctta aaaaaaaaaa aaaaaaaaaa
//