LOCUS       BC013402                2025 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens Paf1, RNA polymerase II associated factor, homolog (S.
            cerevisiae), mRNA (cDNA clone MGC:4224 IMAGE:2960015), complete
            cds.
ACCESSION   BC013402
VERSION     BC013402.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2025)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 10 Row: i Column: 11
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 42476168.
FEATURES             Location/Qualifiers
     source          1..2025
                     /db_xref="H-InvDB:HIT000036251"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:4224 IMAGE:2960015"
                     /tissue_type="Muscle, rhabdomyosarcoma"
                     /clone_lib="NIH_MGC_17"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2025
                     /gene="PAF1"
                     /gene_synonym="F23149_1"
                     /gene_synonym="FLJ11123"
                     /gene_synonym="PD2"
                     /db_xref="GeneID:54623"
                     /db_xref="HGNC:HGNC:25459"
     CDS             248..1843
                     /gene="PAF1"
                     /gene_synonym="F23149_1"
                     /gene_synonym="FLJ11123"
                     /gene_synonym="PD2"
                     /codon_start=1
                     /product="Paf1, RNA polymerase II associated factor,
                     homolog (S. cerevisiae)"
                     /protein_id="AAH13402.1"
                     /db_xref="GeneID:54623"
                     /db_xref="HGNC:HGNC:25459"
                     /translation="MAPTIQTQAQREDGHRPNSHRTLPERSGVVCRVKYCNSLPDIPF
                     DPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDP
                     ADEKLLEEEIQAPTSSKRSQQHAKVVPWMRKTEYISTEFNRYGISNEKPEVKIGVSVK
                     QQFTEEEIYKDRDSQITAIEKTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPC
                     AQVIFDSDPAPKDTSGAAALEMMSQAMIRGMMDEEGNQFVAYFLPVEETLKKRKRDQE
                     EEMDYAPDDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYYNELETRVRLSK
                     RRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMETEEKEAG
                     GSDEEQEKGSSSEKEGSEDEHSGSESEREEGDRDEASDKSGSGEDESSEDEARAARDK
                     EEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSNGGGQRSRSHSRSASPFPSGSE
                     HSAQEDGSEAAASDSSEADSDSD"
BASE COUNT          545 a          516 c          591 g          373 t
ORIGIN      
        1 ggacgagggt cttggcggca gttggtggaa ccggagcttc gagtccgtcc ccggtgctgc
       61 ctgcgcgttc acctgagtct cgctggagct cttctcgccc gcccacctca tctcaaccca
      121 ctttccgcgg ggagcggcgc caagctgggc cttcctcgga tcaggcgtcc cctgaagtcg
      181 gcacgcccct ctgcgtcccc cttcggtccc gctaggaccc cgtccgggct gccgtcgcct
      241 cgtcgctatg gcgcccacca tccagaccca ggcccagcgg gaggatggcc acaggcccaa
      301 ttcccaccgg actctgcctg agaggtctgg agtggtctgc cgagtcaagt actgcaatag
      361 cctccctgat atccccttcg accccaagtt catcacctac cccttcgacc agaacaggtt
      421 cgtccagtac aaagccactt ccttggagaa acagcacaaa catgacctcc tgactgagcc
      481 agacctgggg gtcaccatcg atctcatcaa tcctgacacc taccgcatcg accccaatgt
      541 tcttctagat ccagctgatg agaaactttt ggaagaggag attcaggccc ccaccagctc
      601 caagagatcc cagcagcacg cgaaggtggt gccatggatg cgaaagacag agtacatctc
      661 cactgagttc aaccgttatg gcatctccaa tgagaagcct gaggtcaaga ttggggtttc
      721 tgtgaagcag cagtttaccg aggaagaaat atacaaagac agggatagcc agatcacagc
      781 cattgagaag acttttgagg atgcccagaa atcaatctca cagcattaca gcaaaccccg
      841 agtcacaccg gtggaggtca tgcctgtctt cccagacttt aagatgtgga tcaatccatg
      901 tgctcaggtg atctttgact cagacccagc ccccaaggac acgagtggtg cagctgcgtt
      961 ggagatgatg tctcaggcca tgattagggg catgatggat gaggaaggga accagtttgt
     1021 ggcctatttc ctgcctgtag aagagacgtt gaagaaacga aagcgggacc aggaggagga
     1081 gatggactat gcaccagatg atgtgtatga ctacaaaatt gctcgggagt acaactggaa
     1141 cgtgaagaac aaagctagca agggctatga ggaaaactac ttcttcatct tccgagaggg
     1201 tgacggggtt tactacaatg agttggaaac cagggtccgc cttagtaagc gccgggccaa
     1261 ggctggggtt cagtcaggca ccaacgccct gcttgtggtc aaacatcggg acatgaatga
     1321 gaaggaactg gaagctcagg aggcacggaa ggcccagcta gaaaaccacg aaccggagga
     1381 ggaagaggaa gaggagatgg agacagaaga gaaagaagct gggggctcag atgaggagca
     1441 ggagaagggc agcagcagtg agaaggaggg cagtgaagat gagcactcgg gcagcgagag
     1501 tgaacgggag gaaggtgaca gggacgaggc cagtgacaag agtggcagtg gtgaggacga
     1561 gagcagcgag gatgaggccc gggctgcccg tgacaaagag gagatctttg gcagtgatgc
     1621 tgattctgag gacgatgccg actctgatga tgaggacaga ggacaggccc aaggtggcag
     1681 tgacaatgat tcagacagcg gcagcaatgg gggtggccag cggagccgga gccacagccg
     1741 cagcgccagt cccttcccca gtggcagcga gcactcggcc caggaggatg gcagtgaagc
     1801 tgcagcttct gattccagtg aagctgatag tgacagtgac tgagtcccag ggcattcagg
     1861 gctggttcag acaccattat tgtgagcagc aaagcacttt tctagtggtc tgtttgtgag
     1921 cctttcactt gtttgttccc cacccccaaa cctttgctgt taataaagtc aacttctttt
     1981 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//