LOCUS BC013402 2025 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae), mRNA (cDNA clone MGC:4224 IMAGE:2960015), complete cds. ACCESSION BC013402 VERSION BC013402.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2025) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2025) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 10 Row: i Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42476168. FEATURES Location/Qualifiers source 1..2025 /db_xref="H-InvDB:HIT000036251" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4224 IMAGE:2960015" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2025 /gene="PAF1" /gene_synonym="F23149_1" /gene_synonym="FLJ11123" /gene_synonym="PD2" /db_xref="GeneID:54623" /db_xref="HGNC:HGNC:25459" CDS 248..1843 /gene="PAF1" /gene_synonym="F23149_1" /gene_synonym="FLJ11123" /gene_synonym="PD2" /codon_start=1 /product="Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)" /protein_id="AAH13402.1" /db_xref="GeneID:54623" /db_xref="HGNC:HGNC:25459" /translation="MAPTIQTQAQREDGHRPNSHRTLPERSGVVCRVKYCNSLPDIPF DPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDP ADEKLLEEEIQAPTSSKRSQQHAKVVPWMRKTEYISTEFNRYGISNEKPEVKIGVSVK QQFTEEEIYKDRDSQITAIEKTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPC AQVIFDSDPAPKDTSGAAALEMMSQAMIRGMMDEEGNQFVAYFLPVEETLKKRKRDQE EEMDYAPDDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYYNELETRVRLSK RRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMETEEKEAG GSDEEQEKGSSSEKEGSEDEHSGSESEREEGDRDEASDKSGSGEDESSEDEARAARDK EEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSNGGGQRSRSHSRSASPFPSGSE HSAQEDGSEAAASDSSEADSDSD" BASE COUNT 545 a 516 c 591 g 373 t ORIGIN 1 ggacgagggt cttggcggca gttggtggaa ccggagcttc gagtccgtcc ccggtgctgc 61 ctgcgcgttc acctgagtct cgctggagct cttctcgccc gcccacctca tctcaaccca 121 ctttccgcgg ggagcggcgc caagctgggc cttcctcgga tcaggcgtcc cctgaagtcg 181 gcacgcccct ctgcgtcccc cttcggtccc gctaggaccc cgtccgggct gccgtcgcct 241 cgtcgctatg gcgcccacca tccagaccca ggcccagcgg gaggatggcc acaggcccaa 301 ttcccaccgg actctgcctg agaggtctgg agtggtctgc cgagtcaagt actgcaatag 361 cctccctgat atccccttcg accccaagtt catcacctac cccttcgacc agaacaggtt 421 cgtccagtac aaagccactt ccttggagaa acagcacaaa catgacctcc tgactgagcc 481 agacctgggg gtcaccatcg atctcatcaa tcctgacacc taccgcatcg accccaatgt 541 tcttctagat ccagctgatg agaaactttt ggaagaggag attcaggccc ccaccagctc 601 caagagatcc cagcagcacg cgaaggtggt gccatggatg cgaaagacag agtacatctc 661 cactgagttc aaccgttatg gcatctccaa tgagaagcct gaggtcaaga ttggggtttc 721 tgtgaagcag cagtttaccg aggaagaaat atacaaagac agggatagcc agatcacagc 781 cattgagaag acttttgagg atgcccagaa atcaatctca cagcattaca gcaaaccccg 841 agtcacaccg gtggaggtca tgcctgtctt cccagacttt aagatgtgga tcaatccatg 901 tgctcaggtg atctttgact cagacccagc ccccaaggac acgagtggtg cagctgcgtt 961 ggagatgatg tctcaggcca tgattagggg catgatggat gaggaaggga accagtttgt 1021 ggcctatttc ctgcctgtag aagagacgtt gaagaaacga aagcgggacc aggaggagga 1081 gatggactat gcaccagatg atgtgtatga ctacaaaatt gctcgggagt acaactggaa 1141 cgtgaagaac aaagctagca agggctatga ggaaaactac ttcttcatct tccgagaggg 1201 tgacggggtt tactacaatg agttggaaac cagggtccgc cttagtaagc gccgggccaa 1261 ggctggggtt cagtcaggca ccaacgccct gcttgtggtc aaacatcggg acatgaatga 1321 gaaggaactg gaagctcagg aggcacggaa ggcccagcta gaaaaccacg aaccggagga 1381 ggaagaggaa gaggagatgg agacagaaga gaaagaagct gggggctcag atgaggagca 1441 ggagaagggc agcagcagtg agaaggaggg cagtgaagat gagcactcgg gcagcgagag 1501 tgaacgggag gaaggtgaca gggacgaggc cagtgacaag agtggcagtg gtgaggacga 1561 gagcagcgag gatgaggccc gggctgcccg tgacaaagag gagatctttg gcagtgatgc 1621 tgattctgag gacgatgccg actctgatga tgaggacaga ggacaggccc aaggtggcag 1681 tgacaatgat tcagacagcg gcagcaatgg gggtggccag cggagccgga gccacagccg 1741 cagcgccagt cccttcccca gtggcagcga gcactcggcc caggaggatg gcagtgaagc 1801 tgcagcttct gattccagtg aagctgatag tgacagtgac tgagtcccag ggcattcagg 1861 gctggttcag acaccattat tgtgagcagc aaagcacttt tctagtggtc tgtttgtgag 1921 cctttcactt gtttgttccc cacccccaaa cctttgctgt taataaagtc aacttctttt 1981 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //