LOCUS BC013357 2305 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ring finger protein, LIM domain interacting, mRNA
(cDNA clone MGC:15161 IMAGE:3834870), complete cds.
ACCESSION BC013357
VERSION BC013357.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2305)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2305)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013357.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34452683.
FEATURES Location/Qualifiers
source 1..2305
/db_xref="H-InvDB:HIT000036229"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15161 IMAGE:3834870"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2305
/gene="RLIM"
/gene_synonym="NY-REN-43"
/db_xref="GeneID:51132"
/db_xref="HGNC:HGNC:13429"
/db_xref="MIM:300379"
CDS 193..2067
/gene="RLIM"
/gene_synonym="NY-REN-43"
/codon_start=1
/product="ring finger protein, LIM domain interacting"
/protein_id="AAH13357.1"
/db_xref="GeneID:51132"
/db_xref="HGNC:HGNC:13429"
/db_xref="MIM:300379"
/translation="MENSDSNDKGSGDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDY
RLMRDNNLLGTPGESTEEELLRRLQQIKEGPPPQNSDENRGGDSSDDVSNGDSIIDWL
NSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGSQNSENENEPSA
RRSSGENVENNSQRQVENPRSESTSARPSRSERNSTEALTEVPPTRGQRRARSRSPDH
RRTRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRHHVTLRQQIS
GPELLSRGLFAASGTRNASQGAGSSDTAASGESTGSGQRPPTIVLDLQVRRVRPGEYR
QRDSIASRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNT
GLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDSEPTGSVSNRNMERAESRSGRGGSG
GGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEGSSSSGSSGA
RREGRHRAPVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRSFGENDA
LKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
"
BASE COUNT 742 a 456 c 560 g 547 t
ORIGIN
1 ggaagataat ggctgcctga gcaacgtctc cgagcaggcg ctgggctaga ggcgggtctc
61 aaccagctac tcattggagg cgggcttgag agcggcggcc agggaggtgc ggagcagcct
121 cggcggcggc ggccgaacca accgagtcgg atcctgaccc taaaacctag tattttccac
181 ttgttcatca atatggaaaa ctcagattcc aatgacaaag gaagtggtga tcagtctgca
241 gcacagcgca gaagtcagat ggaccgattg gatcgagaag aagctttcta tcaatttgta
301 aataacctga gtgaagaaga ttataggctt atgagagata acaatttgct aggcacccca
361 ggtgaaagta ctgaggaaga gttgctgaga cgactacagc aaattaaaga aggcccacca
421 ccgcaaaact cagatgaaaa tagaggagga gactcttcag atgatgtgtc taatggtgac
481 tctataatag actggcttaa ctctgtcaga caaactggaa atacaacaag aagtgggcaa
541 agaggaaacc aatcttggag agcagtgagt cggactaatc caaacagtgg tgatttcaga
601 ttcagtttag agataaatgt taaccgtaat aatgggagcc aaaattcaga gaatgaaaat
661 gagccatctg caagacgttc tagtggagaa aatgtggaaa acaacagcca aaggcaagtg
721 gaaaacccac gatctgaatc aacatctgca aggccatcta gatcagaacg aaattcaact
781 gaagcgttaa cagaggtccc acctaccaga ggtcagagga gggcaagaag caggagccca
841 gaccatcgga gaaccagagc aagagctgaa agaagtaggt cacctctgca tccaatgagt
901 gaaattccac gaagatctca tcatagtatc tcatctcaga cttttgaaca tcctttggta
961 aatgagacgg agggaagttc tagaacccgg caccatgtga cattgaggca gcaaatatct
1021 gggcctgagt tgctaagtag aggtcttttt gcagcttctg gaacaagaaa tgcttctcaa
1081 ggagcaggtt cttcagacac agctgccagt ggtgaatcta caggatcagg acagagacct
1141 ccaaccatag tccttgatct tcaagtaaga agagttcgtc ctggagaata tcggcagaga
1201 gatagcatag ccagcagaac tcggtctagg tctcagacac caaacaacac tgtcacctat
1261 gaaagtgaac gaggaggttt taggcgtaca ttttcacgtt ctgagcgggc aggtgtgaga
1321 acctatgtca gtaccatcag aattcccatt cgtagaatct taaatactgg tttaagtgag
1381 actacatctg ttgcaattca gaccatgtta aggcagataa tgacaggttt tggtgagtta
1441 agctatttta tgtacagtga tagcgactca gagcctactg gctcagtctc aaatcgaaat
1501 atggaaaggg cagagtcacg gagtggaaga ggaggttctg gtggtggtag tagttctggt
1561 tccagttcga gttccagttc cagttcgagt tccagttcca gttcaagttc cagttccagt
1621 cctagttcca gttccggtgg tgaaagttca gaaactagct cagatttatt tgaaggcagt
1681 aatgaaggaa gctcatcatc aggctcatca ggtgccaggc gagagggtcg acatagggcc
1741 ccagtcacat ttgatgaaag tggctctttg cccttcctta gcctggctca gtttttcctc
1801 ttaaatgagg atgatgatga ccaacctaga ggactcacca aagaacagat tgacaacttg
1861 gcaatgagaa gttttggtga aaatgatgca ttaaaaacct gtagtgtttg cattacagaa
1921 tatacagaag gcaacaaact tcgtaaacta ccttgttccc atgagtacca tgtccactgc
1981 atcgatcgct ggttatctga gaattctacc tgtcctattt gtcgcagagc agtcttagct
2041 tctggtaaca gagaaagtgt tgtgtaatta agatctgaac tctcagctat gtagctgata
2101 tagtgatggg caaacaggaa tcacttgctt ttatgtccac tttttgagtg gtacttaaat
2161 gtaaagtaac aacctgaatt gagtcattgc tttctgaagg aatcattgtc ctttctccag
2221 tttttgttcc agaataaaag gaaatatttt aaaagccaaa aaaaaaaaaa aaaaaaaaaa
2281 aaaaaaaaaa aaaaaaaaaa aaaaa
//