LOCUS BC013315 1687 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens carbohydrate (chondroitin 4) sulfotransferase 11, mRNA
(cDNA clone MGC:13319 IMAGE:4042813), complete cds.
ACCESSION BC013315
VERSION BC013315.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1687)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1687)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149649.
FEATURES Location/Qualifiers
source 1..1687
/db_xref="H-InvDB:HIT000036207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13319 IMAGE:4042813"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1687
/gene="CHST11"
/gene_synonym="C4ST"
/gene_synonym="C4ST-1"
/gene_synonym="C4ST1"
/gene_synonym="HSA269537"
/db_xref="GeneID:50515"
/db_xref="HGNC:HGNC:17422"
/db_xref="MIM:610128"
CDS 296..1354
/gene="CHST11"
/gene_synonym="C4ST"
/gene_synonym="C4ST-1"
/gene_synonym="C4ST1"
/gene_synonym="HSA269537"
/codon_start=1
/product="carbohydrate (chondroitin 4) sulfotransferase
11"
/protein_id="AAH13315.1"
/db_xref="GeneID:50515"
/db_xref="HGNC:HGNC:17422"
/db_xref="MIM:610128"
/translation="MKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSMLHPVMRRN
PFGVDICCRKGSRSPLQELYNPIQLELSNTAVLHQMRRDQVTDTCRANSATSRKRRVL
TPNDLKHLVVDEDHELIYCYVPKVACTNWKRLMMVLTGRGKYSDPMEIPANEAHVSAN
LKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNISFHKRYGTKIIK
RQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLV
GKYETLEEDSNYVLQLAGVGSYLKFPTYAKSTRTTDEMTTEFFQNISSEHQTQLYEVY
KLDFLMFNYSVPSYLKLE"
BASE COUNT 436 a 469 c 446 g 336 t
ORIGIN
1 ggggagcctt tggagagaag ggagagggcc cgtcggacag ccacagcggc cagcgcagcg
61 gcagcggcgg cggcaccacc atcaccgctc gcaccccagc cgcccggccc gcgaccaggc
121 agcggcggcc gccggcggga tcggaggagg cggcgaagcg actccgatcc tccctctgag
181 ccttgctcag ctctgccccg cgcctcccgg gctccggtcc gcgcggcggg gtccctgctc
241 ctgcgccccg ggcgcgcttc ccggacaccc cggtccccgc agccaggaca aagccatgaa
301 gccagcgctg ctggaagtga tgaggatgaa cagaatctgc cggatggtgc tggccacttg
361 cttgggatcc tttatcctgg tcatcttcta tttccaaagt atgttgcacc cagtcatgcg
421 gaggaatccc tttggtgtgg acatctgctg ccggaagggg tcccgaagcc ccctgcagga
481 actctacaac ccaatccagc tggagctctc aaacactgct gtcctgcacc agatgcggcg
541 ggaccaggtg acagacacgt gccgagccaa cagcgccaca agccgtaagc ggagggtgct
601 gacccccaac gacctgaagc acttggtggt ggatgaggac cacgagctca tctactgcta
661 cgtgcccaag gtggcctgca ccaactggaa gcggctcatg atggtcctga ccgggcgggg
721 gaagtacagc gaccccatgg agatcccggc caacgaggca cacgtctccg ccaacctgaa
781 gaccctgaac cagtacagca tcccagaaat caaccaccgc ttgaaaagct acatgaagtt
841 cctgtttgtc cgggagccct tcgagaggct agtgtccgcc taccgcaaca agttcaccca
901 gaagtacaac atctccttcc acaagcggta cggcaccaag atcatcaaac gccagcggaa
961 gaacgccacc caggaggccc tgcgcaaagg ggacgatgtc aaattcgagg agtttgtggc
1021 ctatctcatc gacccacaca cccagcggga ggagcctttc aacgaacact ggcaaaccgt
1081 ctactcactc tgccatccct gccacatcca ctatgacctc gtgggcaagt acgagacact
1141 ggaagaggat tctaattacg tcctgcagct ggcaggagtg ggcagctacc tgaagttccc
1201 cacctatgca aagtctacga gaactactga tgaaatgacc acagaattct tccagaacat
1261 cagctcagag caccaaacgc agctgtacga agtctacaaa ctcgattttt taatgttcaa
1321 ttactcagtg ccaagctacc tgaaattgga ataaaggggg tggggagagg gagagaatca
1381 tgctttttaa tttaagattt ttatttgtca aaagaattat atggatattg ggttattttg
1441 taaattaata tttctttggg gatgatgctg cgagcagcat agtgagaatt atttaaaatc
1501 cttcgtaggg aaggacagct gtctttgcag gggaaatagg atgggtcgtt cttgtctgta
1561 gaagtgaata ctgcaacact gtctcaaagg tttcttgtgt tctggtgaat tccatgaatt
1621 gtgcattcca taaattctaa ttaatattat ttatagcaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaa
//