LOCUS BC013313 2181 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens gap junction protein, alpha 5, 40kDa, mRNA (cDNA clone
MGC:11185 IMAGE:3844139), complete cds.
ACCESSION BC013313
VERSION BC013313.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2181)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013313.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: o Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32483411.
FEATURES Location/Qualifiers
source 1..2181
/db_xref="H-InvDB:HIT000036206"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11185 IMAGE:3844139"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2181
/gene="GJA5"
/gene_synonym="CX40"
/db_xref="GeneID:2702"
/db_xref="HGNC:HGNC:4279"
/db_xref="MIM:121013"
CDS 113..1189
/gene="GJA5"
/gene_synonym="CX40"
/codon_start=1
/product="GJA5 protein"
/protein_id="AAH13313.1"
/db_xref="GeneID:2702"
/db_xref="HGNC:HGNC:4279"
/db_xref="MIM:121013"
/translation="MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESS
WGDEQADFRCDTIQPGCQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRM
QEKRKLREAERAKEVRGSGSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIR
TTMEVGFIVGQYFIYGIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALS
LLLSLAELYHLGWKKIRQRFVKPRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPG
GKFFNPFSNNMASQQNTDNLVTEQVRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLP
HGYHSDKRRLSKASSKARSDDLSV"
BASE COUNT 522 a 621 c 534 g 504 t
ORIGIN
1 ccattttcaa acagtccctc ctgggagaac acagacaggc agaggattac aacacaaggc
61 agcaagcact gggagacgaa agttttggca tctgttccct ggctgtgcca agatgggcga
121 ttggagcttc ctgggaaatt tcctggagga agtacacaag cactcgaccg tggtaggcaa
181 ggtctggctc actgtcctct tcatattccg tatgctcgtg ctgggcacag ctgctgagtc
241 ttcctggggg gatgagcagg ctgatttccg gtgtgatacg attcagcctg gctgccagaa
301 tgtctgctac gaccaggctt tccccatctc ccacattcgc tactgggtgc tgcagatcat
361 cttcgtctcc acgccctctc tggtgtacat gggccacgcc atgcacactg tgcgcatgca
421 ggagaagcgc aagctacggg aggccgagag ggccaaagag gtccggggct ctggctctta
481 cgagtacccg gtggcagaga aggcagaact gtcctgctgg gaggaaggga atggaaggat
541 tgccctccag ggcactctgc tcaacaccta tgtgtgcagc atcctgatcc gcaccaccat
601 ggaggtgggc ttcattgtgg gccagtactt catctacgga atcttcctga ccaccctgca
661 tgtctgccgc aggagtccct gtccccaccc ggtcaactgt tacgtatccc ggcccacaga
721 gaagaatgtc ttcattgtct ttatgctggc tgtggctgca ctgtccctcc tccttagcct
781 ggctgaactc taccacctgg gctggaagaa gatcagacag cgatttgtca aaccgcggca
841 gcacatggct aagtgccagc tttctggccc ctctgtgggc atagtccaga gctgcacacc
901 accccccgac tttaatcagt gcctggagaa tggccctggg ggaaaattct tcaatccctt
961 cagcaataat atggcctccc aacaaaacac agacaacctg gtcaccgagc aagtacgagg
1021 tcaggagcag actcctgggg aaggtttcat ccaggttcgt tatggccaga agcctgaggt
1081 gcccaatgga gtctcaccag gtcaccgcct tccccatggc tatcatagtg acaagcgacg
1141 tcttagtaag gccagcagca aggcaaggtc agatgaccta tcagtgtgac cctcctttat
1201 gggaggatca ggaccaggtg ggaacaaagg aggctcagag aggaaagacg tgtcccttct
1261 gaactgatgc tttctcactg tcatcactgc ttggctcctt tgagccccgg gtctcaatga
1321 cgttgctcat taattctaga aactataacc agggctctgg gatagtaaga gaggtgacaa
1381 cccacccaga ctgcagttcc ctccccaccc tctacccagt atacgaagcc tttcagatta
1441 ctcatgaaac agggtagagg gaaagaaggg aagcatggca aaagctggcc tggaagggat
1501 agccagaggg atagaatgac tctctctcta cataccagca gcataccaaa tgcgttctct
1561 aagttcctac ctccttgacc tgatcaccct ccctcctcca aggaagagct caaagttccc
1621 agccaataga cagcatgaat caaggaactt gcattatatg tgctcttgaa tctgttgtct
1681 ccatggacca ttcctcggag tagtggtgag atggccttgg gttgcccttg gcttctcctc
1741 cctctactca gccttaaaaa gggcttcttg gaactttacc agcagcctca gctttacaaa
1801 tgccttggta tgtacctctg gcaaatgccc tggtatgtac ctctggcaaa tgccccacct
1861 tggtgatgtt gcaacctttc cttctgctag ggtgtacacc tagcctgtgc aggtgtcagc
1921 cctgctaggg agtcactgta cacacaaact ctactggaat tcctgccaac atctgtcacc
1981 ctgcagctcc tttacagttc aatccaatga tagaaaccat cccttccctt tctcccttgg
2041 ctgttcaccc agccattccc tgaaggcctt accaacagga atatccaaga agctgttgtc
2101 ctctctcgaa ccctgaccag atcatcagcc actgaggcca gtggaatttc cccaggcctt
2161 gttaaaaaaa aaaaaaaaaa a
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