LOCUS BC013302 1532 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD151 molecule (Raph blood group), mRNA (cDNA clone
MGC:4431 IMAGE:2958615), complete cds.
ACCESSION BC013302
VERSION BC013302.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1532)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1532)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013302.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34328913.
FEATURES Location/Qualifiers
source 1..1532
/db_xref="H-InvDB:HIT000036198"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4431 IMAGE:2958615"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1532
/gene="CD151"
/gene_synonym="GP27"
/gene_synonym="PETA-3"
/gene_synonym="RAPH"
/gene_synonym="SFA1"
/gene_synonym="TSPAN24"
/db_xref="GeneID:977"
/db_xref="HGNC:HGNC:1630"
/db_xref="MIM:602243"
CDS 117..878
/gene="CD151"
/gene_synonym="GP27"
/gene_synonym="PETA-3"
/gene_synonym="RAPH"
/gene_synonym="SFA1"
/gene_synonym="TSPAN24"
/codon_start=1
/product="CD151 molecule (Raph blood group)"
/protein_id="AAH13302.1"
/db_xref="GeneID:977"
/db_xref="HGNC:HGNC:1630"
/db_xref="MIM:602243"
/translation="MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLAL
KSDYISLLASGTYLATAYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFL
LEIIAGILAYAYYQQLNTELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNN
SQDWRDSEWIRSQEAGGRVVPDSCCKTVVALCGQRDHASNIYKVEGGCITKLETFIQE
HLRVIGAVGIGIACVQVFGMIFTCCLYRSLKLEHY"
BASE COUNT 293 a 479 c 450 g 310 t
ORIGIN
1 cgcccccgca gctgccgccg ccgccagggc ccggactcgg acgcgtgcct agagtcctgg
61 ggagcttctg tccacctgtc ctgcagagga gtcgtttcca gcccggctgc cccaggatgg
121 gtgagttcaa cgagaagaag acaacatgtg gcaccgtttg cctcaagtac ctgctgttta
181 cctacaattg ctgcttctgg ctggctggcc tggctgtcat ggcagtgggc atctggacgc
241 tggccctcaa gagtgactac atcagcctgc tggcctcagg cacctacctg gccacagcct
301 acatcctggt ggtggcgggc actgtcgtca tggtgactgg ggtcttgggc tgctgcgcca
361 ccttcaagga gcgtcggaac ctgctgcgcc tgtacttcat cctgctcctc atcatctttc
421 tgctggagat catcgctggt atcctcgcct acgcctacta ccagcagctg aacacggagc
481 tcaaggagaa cctgaaggac accatgacca agcgctacca ccagccgggc catgaggctg
541 tgaccagcgc tgtggaccag ctgcagcagg agttccactg ctgtggcagc aacaactcac
601 aggactggcg agacagtgag tggatccgct cacaggaggc cggtggccgt gtggtcccag
661 acagctgctg caagacggtg gtggctcttt gtggacagcg agaccatgcc tccaacatct
721 acaaggtgga gggcggctgc atcaccaagt tggagacctt catccaggag cacctgaggg
781 tcattggggc tgtggggatc ggcattgcct gtgtgcaggt ctttggcatg atcttcacgt
841 gctgcctgta caggagtctc aagctggagc actactgacc ctgccttggg ccttgctgct
901 gctgcaccca actactgagc tgagaccact gagtaccagg ggctgggctc cctgatgaca
961 cccaccctgt gccatcacca taacctctgg ggaccccaac ctcagaggca gcttcaagtg
1021 ccttttgctg cgcaccaatg cccagcaggg gaggtgaggg gggctggcgg ggcgaagttt
1081 ggggggtgtt ttgtggggct ccccggacat actctctgcc tggtggtcag atgcaggttg
1141 gaaggggcct tgctgagtgg cgcaaggccg agcgttccca gcagggggag aaacccttca
1201 caccccaggc ccttcaggaa ctggggcttt gccttgcagc cacatggccc catcccagtt
1261 ggggaagcca ggtgagctct gacccttggg cctgggcctc tgcccctccc aacccagccg
1321 tcgtctccct cgacagcgcc cctgctgtct tccccaccgc agtcaccacc acccgaaatg
1381 ccacgtggtc actgtgcact gccctgttca tgtgcctctg cggggcaggg ccttcctggt
1441 tttgtacact gctgtaccca gatgcctaca accatccctg ccacatacag gtgctcaata
1501 aacacttgta gagcaaaaaa aaaaaaaaaa aa
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