LOCUS BC013294 1244 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens DKFZP564O0823 protein, mRNA (cDNA clone MGC:3551
IMAGE:3028327), complete cds.
ACCESSION BC013294
VERSION BC013294.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1244)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1244)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC013294.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54400757.
FEATURES Location/Qualifiers
source 1..1244
/db_xref="H-InvDB:HIT000036191"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3551 IMAGE:3028327"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1244
/gene="DKFZP564O0823"
/db_xref="GeneID:25849"
CDS 183..1115
/gene="DKFZP564O0823"
/codon_start=1
/product="DKFZP564O0823 protein"
/protein_id="AAH13294.1"
/db_xref="GeneID:25849"
/translation="MVYKTLFALCILTAGWRVQSLPTSAPLSVSLPTNIVPPTTIWTS
SPQNTDADTASPSNGTHNNSVLPVTASAPTSLLPKNISIESREEEITSPGSNWEGTNT
DPSPSGFSSTSGGVHLTTTLKEHSSGTPEAGVAATLSQSAAEPPTLISPQAPASSPSS
LSTSPPEVFSASVTTNHSSTVTSTQPTGAPTAPESPTEESSSDHTPTSHATAEPVPQE
KTPPTTVSGKVMCELIDMETTTTFPRVIMQEVEHALSSGSIAAITVTVIAVVLLVFGV
AAYLKIRHSSYGRLLDDHDYGSWGNYNNPLYDDS"
BASE COUNT 320 a 405 c 261 g 258 t
ORIGIN
1 gctgacggag ctgcgctgcg ttcgcctcgt ttgcctcgcg ccctccactg gagctgttcg
61 cgcctcccgg ctcccaccgc agcccacccg gcagaggagt cgctaccagc gcccagtgcg
121 ctctgtcagt ccgcaaactc cttgccgccc gccccgggct gggcaccaaa taccaggcta
181 ccatggtcta caagactctc ttcgctcttt gcatcttaac cgcaggatgg agggtacaga
241 gtctgcctac atcagctcct ttgtctgttt ctcttccgac aaacattgta ccaccgacca
301 ccatctggac tagctctcca caaaacactg atgcagacac tgcctcccca tccaacggca
361 ctcacaacaa ctcggtgctc ccagttacag catcagcccc aacatctctg cttcctaaga
421 acatttccat agagtccaga gaagaggaga tcaccagccc aggttcgaat tgggaaggca
481 caaacacaga cccctcacct tctgggttct cgtcaacaag cggtggagtc cacttaacaa
541 ccacgttgaa ggaacacagc tcgggcactc ctgaagcagg cgtggcagct acactgtcgc
601 agtccgctgc tgagcctccc acactcatct cccctcaagc tccagcctca tcaccctcat
661 ccctatcaac ctcaccacct gaggtctttt ctgcctccgt tactaccaac catagctcca
721 ctgtgaccag cacccaaccc actggagctc caactgcacc agagtccccg acagaggagt
781 ccagctctga ccacacaccc acttcacatg ccacagctga gccagtaccc caggagaaaa
841 cacccccaac aactgtgtca ggcaaagtga tgtgtgagct catagacatg gagaccacca
901 ccacctttcc cagggtgatc atgcaggaag tagaacatgc attaagttca ggcagcatcg
961 ccgccattac cgtgacagtc attgccgtgg tgctgctggt gtttggagtt gcagcctacc
1021 taaaaatcag gcattcctcc tatggaagac ttttggacga ccatgactac gggtcctggg
1081 gaaactacaa caaccctctg tacgatgact cctaacaatg gaatatggcc tgggatgagg
1141 attaactgtt ctttatttat aagtgcttat ccagtagaat taataagtac ctgatgcgca
1201 ttgaacgaca atcttaagcc ctgaaaaaaa aaaaaaaaaa aaaa
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