LOCUS BC013162 728 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens selenoprotein K, mRNA (cDNA clone MGC:17057
IMAGE:4345594), complete cds.
ACCESSION BC013162
VERSION BC013162.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 728)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 728)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46370091.
FEATURES Location/Qualifiers
source 1..728
/db_xref="H-InvDB:HIT000036157"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17057 IMAGE:4345594"
/tissue_type="Adrenal cortex, carcinoma"
/clone_lib="NIH_MGC_84"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..728
/gene="SELK"
/gene_synonym="HSPC030"
/gene_synonym="HSPC297"
/gene_synonym="MGC17057"
/db_xref="GeneID:58515"
/db_xref="MIM:607916"
CDS 71..355
/gene="SELK"
/gene_synonym="HSPC030"
/gene_synonym="HSPC297"
/gene_synonym="MGC17057"
/codon_start=1
/transl_except=(pos:344..346,aa:Sec)
/product="selenoprotein K"
/protein_id="AAH13162.2"
/db_xref="GeneID:58515"
/db_xref="MIM:607916"
/translation="MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQ
DVKKRRSYGNSSDSRYDDGRGPPGNPPRRMGRINHLRGPSPPPMAGGUGR"
BASE COUNT 234 a 133 c 180 g 181 t
ORIGIN
1 agcagaggga gatacagaaa ccgacagggg ccaggcgccc ggtggctccg aagcggggaa
61 gtgggacaag atggtttaca tctcgaacgg acaagtgttg gacagccgga gtcagtctcc
121 atggagatta tctttgataa cagatttctt ctggggaata gctgagtttg tggttttgtt
181 tttcaaaact ctgcttcagc aagatgtgaa aaaaagaaga agctatggaa actcatctga
241 ttccagatat gatgatggaa gagggccacc aggaaaccct ccccgaagaa tgggtagaat
301 caatcatctg cgtggcccta gtccccctcc aatggctggt ggatgaggaa ggtaaatgtc
361 tgctctaaga agcagacaac cggacatgcg cattcatagc agaaggaaac catcaagaag
421 tggaaggctg accatgatga gcagtagatg aatgtgtatg tctaaacaag gactgctctg
481 tgtcctcaca gatgaatgag gtcatgctgg gaattccctc tgcagggaac tggcctgact
541 gacatgcagt tccataaatg cagatgtttg tctcattacc tttttgtata gtttattaaa
601 gtattaatat agttttaata agtaaatatt tttaggttgc agaatggact cctcatcttt
661 atattcacga aaaagcaatc tgaagaaaac aaataaaagc ctgtgtattt agcaaaaaaa
721 aaaaaaaa
//