LOCUS BC013142 1978 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens interleukin 1, alpha, mRNA (cDNA clone MGC:9225 IMAGE:3875617), complete cds. ACCESSION BC013142 VERSION BC013142.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1978) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1978) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC013142.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: p Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27894329. FEATURES Location/Qualifiers source 1..1978 /db_xref="H-InvDB:HIT000036146" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9225 IMAGE:3875617" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_68" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1978 /gene="IL1A" /gene_synonym="IL-1A" /gene_synonym="IL1-ALPHA" /gene_synonym="IL1F1" /db_xref="GeneID:3552" /db_xref="HGNC:HGNC:5991" /db_xref="MIM:147760" CDS 10..825 /gene="IL1A" /gene_synonym="IL-1A" /gene_synonym="IL1-ALPHA" /gene_synonym="IL1F1" /codon_start=1 /product="interleukin 1, alpha" /protein_id="AAH13142.1" /db_xref="GeneID:3552" /db_xref="HGNC:HGNC:5991" /db_xref="MIM:147760" /translation="MAKVPDMFEDLKNCYSENEEDSSSIDHLSLNQKSFYHVSYGPLH EGCMDQSVSLSISETSKTSKLTFKESMVVVATNGKVLKKRRLSLSQSITDDDLEAIAN DSEEEIIKPRSAPFSFLSNVKYNFMRIIKYEFILNDALNQSIIRANDQYLTAAALHNL DEAVKFDMGAYKSSKDDAKITVILRISKTQLYVTAQDEDQPVLLKEMPEIPKTITGSE TNLLFFWETHGTKNYFTSVAHPNLFIATKQDYWVCLAGGPPSITDFQILENQA" BASE COUNT 640 a 395 c 360 g 583 t ORIGIN 1 gaagtcaaga tggccaaagt tccagacatg tttgaagacc tgaagaactg ttacagtgaa 61 aatgaagaag acagttcctc cattgatcat ctgtctctga atcagaaatc cttctatcat 121 gtaagctatg gcccactcca tgaaggctgc atggatcaat ctgtgtctct gagtatctct 181 gaaacctcta aaacatccaa gcttaccttc aaggagagca tggtggtagt agcaaccaac 241 gggaaggttc tgaagaagag acggttgagt ttaagccaat ccatcactga tgatgacctg 301 gaggccatcg ccaatgactc agaggaagaa atcatcaagc ctaggtcagc accttttagc 361 ttcctgagca atgtgaaata caactttatg aggatcatca aatacgaatt catcctgaat 421 gacgccctca atcaaagtat aattcgagcc aatgatcagt acctcacggc tgctgcatta 481 cataatctgg atgaagcagt gaaatttgac atgggtgctt ataagtcatc aaaggatgat 541 gctaaaatta ccgtgattct aagaatctca aaaactcaat tgtatgtgac tgcccaagat 601 gaagaccaac cagtgctgct gaaggagatg cctgagatac ccaaaaccat cacaggtagt 661 gagaccaacc tcctcttctt ctgggaaact cacggcacta agaactattt cacatcagtt 721 gcccatccaa acttgtttat tgccacaaag caagactact gggtgtgctt ggcagggggg 781 ccaccctcta tcactgactt tcagatactg gaaaaccagg cgtaggtctg gagtctcact 841 tgtctcactt gtgcagtgtt gacagttcat atgtaccatg tacatgaaga agctaaatcc 901 tttactgtta gtcatttgct gagcatgtac tgagccttgt aattctaaat gaatgtttac 961 actctttgta agagtggaac caacactaac atataatgtt gttatttaaa gaacacccta 1021 tattttgcat agtaccaatc attttaatta ttattcttca taacaatttt aggaggacca 1081 gagctactga ctatggctac caaaaagact ctacccatat tacagatggg caaattaagg 1141 cataagaaaa ctaagaaata tgcacaatag cagttgaaac aagaagccac agacctagga 1201 tttcatgatt tcatttcaac tgtttgcctt ctacttttaa gttgctgatg aactcttaat 1261 caaatagcat aagtttctgg gacctcagtt ttatcatttt caaaatggag ggaataatac 1321 ctaagccttc ctgccgcaac agttttttat gctaatcagg gaggtcattt tggtaaaata 1381 cttcttgaag ccgagcctca agatgaaggc aaagcacgaa atgttatttt ttaattatta 1441 tttatatatg tatttataaa tatatttaag ataattataa tatactatat ttatgggaac 1501 cccttcatcc tctgagtgtg accaggcatc ctccacaata gcagacagtg ttttctggga 1561 taagtaagtt tgatttcatt aatacagggc attttggtcc aagttgtgct tatcccatag 1621 ccaggaaact ctgcattcta gtacttggga gacctgtaat catataataa atgtacatta 1681 attaccttga gccagtaatt ggtccgatct ttgactcttt tgccattaaa cttacctggg 1741 cattcttgtt tcaattccac ctgcaatcaa gtcctacaag ctaaaattag atgaactcaa 1801 ctttgacaac catgagacca ctgttatcaa aactttcttt tctggaatgt aatcaatgtt 1861 tcttctaggt tctaaaaatt gtgatcagac cataatgtta cattattatc aacaatagtg 1921 attgatagag tgttatcagt cataactaaa taaagcttgc aacaaaaaaa aaaaaaaa //