LOCUS BC013124 4226 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), mRNA (cDNA clone MGC:5167 IMAGE:3048375), complete cds. ACCESSION BC013124 VERSION BC013124.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4226) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4226) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC013124.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: l Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42734318. FEATURES Location/Qualifiers source 1..4226 /db_xref="H-InvDB:HIT000036135" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5167 IMAGE:3048375" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4226 /gene="DCLRE1A" /gene_synonym="KIAA0086" /gene_synonym="PSO2" /gene_synonym="SNM1" /db_xref="GeneID:9937" /db_xref="HGNC:HGNC:17660" /db_xref="MIM:609682" CDS 667..3789 /gene="DCLRE1A" /gene_synonym="KIAA0086" /gene_synonym="PSO2" /gene_synonym="SNM1" /codon_start=1 /product="DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae)" /protein_id="AAH13124.1" /db_xref="GeneID:9937" /db_xref="HGNC:HGNC:17660" /db_xref="MIM:609682" /translation="MLEDISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQ SKRSRNRKRAAEAKEVKDHEVPLGNAGCQTSVASSQNSSCGDGIQQTQDKETTPGKLC RTQKSQHVSPKIRPVYDGYCPNCQMPFSSLIGQTPRWHVFECLDSPPRSETECPDGLL CTSTIPFHYKRYTHFLLAQSRAGDHPFSSPSPASGGSFSETKSGVLCSLEERWSSYQN QTDNSVSNDPLLMTQYFKKSPSLTEASEKISTHIQTSQQALQFTDFVENDKLVGVALR LANNSEHINLPLPENDFSDCEISYSPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSL EEDDDSCGFFKKRHGPLLKDQDESCPKVNSFLTRDKYDEGLYRFNSLNDLSQPISQNN ESTLPYDLACTGGDFVLFPPALAGKLAASVHQATKAKPDEPEFHSAQSNKQKQVIEES SVYNQVSLPLVKSLMLKPFESQVEGYLSSQPTQNTIRKLSSENLNAKNNTNSACFCRK ALEGVPVGKATILNTENLSSTPAPKYLKILPSGLKYNARHPSTKVMKQMDIGVYFGLP PKRKEEKLLGESALEGINLNPVPSPNQKRSSQCKRKAEKSLSDLEFDASTLHESQLSV ELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKVFTKSAHGGLQR GNKKIPESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAG LSKHFTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAV MILFYLPNGTVILHTGDFRADPSMERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIR FAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP EINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTR IADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKY FREWKLEAGY" BASE COUNT 1346 a 780 c 862 g 1238 t ORIGIN 1 gggattgttc attgctgctg gaggaagatc atggactgtc gcgggaaact gaagtggttg 61 agtatccact agtcgtggat gagggcagtg acttcgcagt tttttgcgaa ttacacatct 121 ctttgattat gttgtgacta gttttgttag atagtcattt agtgtttggg atacctgtta 181 agccctttgt ccagggactg tggttggatt tatgaattat ttggacggtt gtccacttga 241 aagaactgac agtagcttca taacaatgtt acaaatctcg ttctaagatt aagctgttga 301 acctatattt gccattagcg cttaattttt gaagtattat ttttatgaat caagccctgg 361 aaaaggacaa gatatttgaa tgaaatagca cccataatgg agaacttcac agttgctact 421 cctgtgatag gtttatctta gtttcattgt ggtataaatg gaatagcagg tgttgtcagg 481 tacaaggttt gtagcttgcc aatatgttca ttaccaacac tgcagattcc cattgagttg 541 gtgggggttt tgttaccttt gttttttttc tcagcaaaat aattctataa ctttttgttt 601 gtgacaagaa atggactttc agtttactta agattaatac ttcttgaatg ataaaatcat 661 tttgccatgt tagaagacat ttccgaagaa gacatttggg aatacaaatc taaaagaaaa 721 ccaaaacgag ttgatccaaa taatggctct aaaaatattc taaaatctgt tgaaaaagca 781 acagatggaa aataccagtc aaaacggagt agaaacagaa aaagagccgc agaagctaaa 841 gaggtgaagg accatgaagt gccccttgga aatgcaggtt gtcagacttc tgttgcttct 901 agtcagaatt caagttgtgg agatggtatt cagcagaccc aagacaagga aactactcca 961 ggaaaactct gtagaactca aaaaagccaa cacgtgtccc caaagatacg tccagtttat 1021 gatggatact gtccaaattg ccagatgcct ttttcctcat tgatagggca gacacctcga 1081 tggcatgttt ttgaatgttt ggattctcca ccacgctctg aaacagagtg tcctgatggt 1141 cttctgtgta cctcaaccat tccttttcat tacaagagat acactcactt cctgctagct 1201 caaagcaggg ctggtgatca tccttttagc agcccatcac ctgcgtcagg tggcagtttc 1261 agtgagacta agtcaggcgt cctttgtagc cttgaggaaa gatggtcttc gtatcagaac 1321 caaactgata actcggtttc aaatgatccc ttattgatga cacagtattt taaaaagtct 1381 ccgtctctga ctgaagccag tgaaaagatt tctactcata tccaaacatc ccaacaagct 1441 ctacaattta cagattttgt tgagaatgac aaactagtgg gagttgcttt gcgtcttgca 1501 aacaactcag aacacataaa tttgccattg ccagaaaatg acttcagtga ctgtgaaatc 1561 tcctattctc cacttcaaag tgatgaagac actcatgata tcgatgaaaa accggatgat 1621 tcacaagaac aactgttttt taccgaaagc tcaaaagatg gcagcctcga agaagatgat 1681 gacagctgtg gtttttttaa aaaacgacat ggtcccttac tgaaggacca ggatgagagc 1741 tgccccaaag tgaacagctt cttaactcgg gataagtatg atgaaggatt gtatagattc 1801 aatagtctaa atgatttgtc tcaacctatt tctcaaaata atgagagtac tttgccttat 1861 gatctggcat gtactggtgg tgattttgtg ttgtttccac ctgcattggc agggaagctt 1921 gctgcttctg ttcatcaggc aactaaagca aaacctgatg agccagaatt tcactcagct 1981 caatcaaata aacagaaaca ggtaattgaa gaatcatctg tttacaatca agtttctctt 2041 ccgttagtta agagtttaat gttgaaacct tttgaaagtc aggtagaagg gtatctttct 2101 tcccaaccaa cccaaaatac aattagaaaa ttatcaagtg agaacttgaa tgctaagaat 2161 aatactaact cagcatgttt ctgcagaaag gcattagagg gtgtgccagt tggtaaagct 2221 acaattttaa atacagaaaa cttgtctagt acacctgctc cgaagtattt gaaaatattg 2281 ccttctggtc ttaagtataa tgcaagacat ccttctacca aggtaatgaa gcaaatggat 2341 ataggtgtgt attttggact acctcccaaa agaaaggaag agaaattgct aggggaaagt 2401 gcattagaag ggataaactt aaatccagtt ccaagtccta atcaaaagag gtcctcgcag 2461 tgcaagagga aagcagaaaa atctttaagt gatttagaat ttgatgcaag tactttacat 2521 gagagtcagc tttctgtgga actttctagt gagaggtcac agcgtcaaaa aaagagatgt 2581 agaaagtcaa attcactgca ggaaggagcg tgtcagaaga gatcagatca ccttattaat 2641 acagaatctg aagcagtcaa tttaagtaaa gtcaaagtct tcacaaaatc agctcatggt 2701 gggctgcaaa ggggcaacaa gaaaatccca gagtcatcta atgtaggagg atcaagaaaa 2761 aagacatgtc cattctataa gaaaatacct ggaaccggct ttacagttga tgcctttcag 2821 tatggcgtgg ttgaaggttg cacagcctat tttctcacac attttcattc tgatcattat 2881 gctggattgt ctaaacactt cacatttcca gtttattgta gtgagataac tggcaatttg 2941 ttgaagaaca agcttcatgt gcaagaacaa tatattcacc cattgccact ggacactgaa 3001 tgtattgtga atggtgtcaa agttgttttg cttgatgcca atcactgtcc aggtgctgtc 3061 atgatcctct tttatcttcc taatggtact gtcatattac acacgggaga cttcagagca 3121 gatcccagca tggaacgttc tcttcttgcg gaccagaaag tccatatgct gtacttagat 3181 accacatatt gtagcccaga atacaccttt ccatctcagc aagaggttat ccggtttgcc 3241 atcaacactg cctttgaggc tgtaactcta aacccacatg ctcttgttgt ctgtggcact 3301 tactctattg gaaaagagaa agtcttccta gccattgctg atgttttagg ttcaaaagtg 3361 ggcatgtccc aggaaaaata taaaactcta cagtgcctca atataccaga aattaattca 3421 ctcatcacta ccgacatgtg cagttcattg gttcaccttc tcccaatgat gcaaattaat 3481 tttaagggct tacagagtca tttgaagaag tgtggtggga aatacaatca gattttggca 3541 tttcgaccta caggatggac acactctaac aagttcacta gaatagcaga tgttattccc 3601 cagaccaaag gaaacatttc aatatatgga attccttaca gtgaacacag cagctaccta 3661 gaaatgaagc gctttgtcca gtggctgaag ccccagaaaa tcatacctac tgtaaatgtg 3721 ggcacctgga aatctaggag cacaatggag aaatatttta gagagtggaa attggaagct 3781 ggatattgat gatacctccg aggattcagt agtagttaag ttccttggat gtagcttgtt 3841 agtagttaaa tctatagaaa tgtgaaatac actttgtgtg gaaaaacctc atgaagattg 3901 ttcagatact ttattttctc atttatgttt gaacaacatg ttcgtggtgc tgaatgcctc 3961 tcagcatcat caaggataac tgaaactggg tctccctggg acccttaatt tcttgtcccc 4021 tgccctccat gggcagttat attctgcatc aagccttaga agaggaagca aaggcagatt 4081 cagggaccaa aaggattaat gataattaat aaagtagttt gaagcattat atatataagt 4141 aattatgtgt ctttaaaatt atgagatgaa acttttatat gacgtgtata cttaaataaa 4201 attaatataa aaaaaaaaaa aaaaaa //