LOCUS BC013115 1538 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens RNA binding motif protein 9, mRNA (cDNA clone
MGC:16969 IMAGE:4346741), complete cds.
ACCESSION BC013115
VERSION BC013115.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1538)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1538)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657503.
FEATURES Location/Qualifiers
source 1..1538
/db_xref="H-InvDB:HIT000036130"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16969 IMAGE:4346741"
/tissue_type="Adrenal cortex, carcinoma"
/clone_lib="NIH_MGC_84"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1538
/gene="RBM9"
/gene_synonym="HRNBP2"
/gene_synonym="RTA"
/db_xref="GeneID:23543"
CDS 190..1266
/gene="RBM9"
/gene_synonym="HRNBP2"
/gene_synonym="RTA"
/codon_start=1
/product="RBM9 protein"
/protein_id="AAH13115.1"
/db_xref="GeneID:23543"
/translation="MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGV
PHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSE
NSESKSTPKRLHVSNIPFRFRDPDLRQMFGGFGFVTFENSADADRAREKLHGTVVEGR
KIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVP
LSGRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYP
GVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAVAAYSDGYGRVYTADPYHALA
PAASYGVGAVASLYRGGYSRFAPY"
misc_feature 523..684
/gene="RBM9"
/gene_synonym="HRNBP2"
/gene_synonym="RTA"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
BASE COUNT 454 a 364 c 378 g 342 t
ORIGIN
1 ctgccagaga ggaagagaaa agaaaggaag aaacattaga aagaaaaagg aaggaaaacg
61 gtataaagag agatcaatta cccaccctta aatagctaga ttgggggggg aggggggtgg
121 aaaagaaagc tctagaggtg tgccccagca cggctgcgag gaaaggttta tcatctatcc
181 gtttggttta tggagaaaaa gaaaatggta actcagggta accaggagcc gacaacaact
241 cctgacgcaa tggttcagcc ttttactacc atcccatttc caccacctcc gcagaatgga
301 attcccacag agtatggggt gccacacact caagactatg ccggccagac cggtgagcat
361 aacctgacac tctacggaag tacgcaagcc cacggggagc agagcagcaa ctcacccagc
421 acacaaaatg gatctcttac gacagaaggt ggagcacaga cagacggcca gcagtcacag
481 acacaaagta gtgaaaattc agagagtaaa tctaccccga aacggctgca tgtctctaat
541 attcctttcc gcttccggga ccctgacctc cggcagatgt ttgggggatt cgggttcgta
601 actttcgaga atagtgctga tgcagacagg gccagggaga aattacacgg caccgtggta
661 gagggccgta aaatcgaggt gaataatgct acagcacgtg taatgaccaa taagaagatg
721 gtcacaccat atgcaaatgg ttggaaatta agcccagtag ttggagctgt atatggtccg
781 gagttatatg cagcatccag ctttcaagca gatgtgtccc taggcaatga tgcagcagtg
841 cccctatcag gaagaggggg tatcaacact tacattcctt taatcattcc tggcttccct
901 taccctactg cagccaccac ggcagccgct ttcagaggag cccatttgag gggcagaggg
961 cggacagtat atggtgcagt ccgagcggta cctccaacag ccatccccgc ctatccaggt
1021 gtggtttacc aggacggatt ttacggtgct gacctctatg gtggatatgc agcctacaga
1081 tatgcacagc ctgctactgc aaccgcagcc accgctgctg cagccgctgt agccgcttac
1141 agtgacggtt atggcagggt gtacacagcc gacccctacc atgcccttgc ccctgccgct
1201 agctatggag ttggcgctgt ggcgagttta taccgaggtg gctacagccg atttgccccc
1261 tactgaagtg acgtgagacc cctgcaaatg ggacagcccc ccagttcatg aggcctggct
1321 attgcaatat ttactagtag aggaactcta tagcaagatg aagaggaaaa acaaacaaac
1381 aaacaaaaaa aaacacaaaa aaagaaagaa tactttttta tacctcacta tgttctttga
1441 atatgtattt ttcctttaaa tttctgcctt taattctttt gttccaaaga ttgtgcattt
1501 ttttcttttt ttttttaaac tgtggtaaaa aaaaaaaa
//