LOCUS BC013097 963 bp mRNA linear HUM 03-FEB-2004 DEFINITION Homo sapiens chromosome 9 open reading frame 80, mRNA (cDNA clone IMAGE:4342185), partial cds. ACCESSION BC013097 VERSION BC013097.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 963) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 963) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: j Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24308268. FEATURES Location/Qualifiers source 1..963 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4342185" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..963 /gene="C9orf80" /gene_synonym="HSPC043" /db_xref="GeneID:58493" CDS <1..171 /gene="C9orf80" /gene_synonym="HSPC043" /codon_start=1 /product="C9orf80 protein" /protein_id="AAH13097.1" /db_xref="GeneID:58493" /translation="NCHWTYLKQNRKMAANSSGQGFQNKNRVAILAELDKEKRKLLMQ NQSSTNHPGARY" BASE COUNT 298 a 211 c 224 g 230 t ORIGIN 1 aattgccact ggacatactt gaaacaaaat aggaaaatgg cagcaaactc ttcaggacaa 61 ggttttcaaa acaaaaatag agttgcaatc ttggcagaac tggacaaaga gaaaagaaaa 121 ctacttatgc agaaccagtc ttcaacaaat catcctggag ctaggtattg acactataat 181 gtgggttttt tgtttgtttt gttttgtttt gttttgagac ggagtctcgc cctgtccccc 241 aggctggagt gcaatggtgc aatctcggct cactgcagcc tccgcctccc gggttctagc 301 gattctcctg cctcagcctc ccgagtagct gggattacag gcacctgcca cgacacccag 361 caaatttttg tatttttagt agagatgggg tttcaccatg caggttaggc tggtcttcat 421 ctcctgacct caggtgatcc acccgccttg gtctcccaaa atgctgggat tacaggcgtg 481 agccaccatg cccggcaata atggatctga gggaagatac taaatatggc agagactgaa 541 tacctataat aaagatcatc aagctaccta aatttggcct actttgcaga atgattaaaa 601 agtggggcac tagcagcaat tgcagtaata aaaaaccata caaaactcaa aaaaaaaaaa 661 aggctataag ggctaggtgc agtggctaac gcttgtaatc ccagcacttt gggaggctga 721 ggcaggagga tcacttgagg ccaggagttt gagaccagcc tgggcaacac aagacctcac 781 ttgtttctac taaaaaacaa aaaaattagc caggtgtggt agggtgcacc tgtagtgtga 841 gatactcagg ggcgatcacc tgagcccagg agactcagga tgtagtgagt tatgattgtg 901 ccactccact ccactctagg tgacagagtt agaccctgtc tcaaaaaaaa aaaaaaaaaa 961 aaa //