LOCUS BC013083 818 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens cystatin C, mRNA (cDNA clone MGC:18114 IMAGE:4153023), complete cds. ACCESSION BC013083 VERSION BC013083.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 818) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 818) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: p Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19882253. FEATURES Location/Qualifiers source 1..818 /db_xref="H-InvDB:HIT000036116" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:18114 IMAGE:4153023" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..818 /gene="CST3" /gene_synonym="ARMD11" /db_xref="GeneID:1471" /db_xref="HGNC:HGNC:2475" /db_xref="MIM:604312" CDS 76..516 /gene="CST3" /gene_synonym="ARMD11" /codon_start=1 /product="cystatin C" /protein_id="AAH13083.1" /db_xref="GeneID:1471" /db_xref="HGNC:HGNC:2475" /db_xref="MIM:604312" /translation="MAGPLRAPLLLLAILAVALAVSPAAGSSPGKPPRLVGGPMDASV EEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKT QPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQDA" BASE COUNT 175 a 281 c 217 g 145 t ORIGIN 1 cgcagcgggt cctctctatc tagctccagc ctctcgcctg cgccccactc cccgcgtccc 61 gcgtcctagc cgaccatggc cgggcccctg cgcgccccgc tgctcctgct ggccatcctg 121 gccgtggccc tggccgtgag ccccgcggcc ggctccagtc ccggcaagcc gccgcgcctg 181 gtgggaggcc ccatggacgc cagcgtggag gaggagggtg tgcggcgtgc actggacttt 241 gccgtcggcg agtacaacaa agccagcaac gacatgtacc acagccgcgc gctgcaggtg 301 gtgcgcgccc gcaagcagat cgtagctggg gtgaactact tcttggacgt ggagctgggc 361 cgaaccacgt gtaccaagac ccagcccaac ttggacaact gccccttcca tgaccagcca 421 catctgaaaa ggaaagcatt ctgctctttc cagatctacg ctgtgccttg gcagggcaca 481 atgaccttgt cgaaatccac ctgtcaggac gcctaggggt ctgtaccggg ctggcctgtg 541 cctatcacct cttatgcaca cctcccaccc cctgtattcc cacccctgga ctggtggccc 601 ctgccttggg gaaggtctcc ccatgtgcct gcaccaggag acagacagag aaggcagcag 661 gcggcctttg ttgctcagca aggggctctg ccctccctcc ttccttcttg cttctcatag 721 ccccggtgtg cggtgcatac acccccacct cctgcaataa aatagtagca tcggcaaaaa 781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //