LOCUS BC013017 872 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD63 molecule, mRNA (cDNA clone MGC:4528
IMAGE:3010594), complete cds.
ACCESSION BC013017
VERSION BC013017.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 872)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 872)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC013017.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34328936.
FEATURES Location/Qualifiers
source 1..872
/db_xref="H-InvDB:HIT000036084"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4528 IMAGE:3010594"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..872
/gene="CD63"
/gene_synonym="LAMP-3"
/gene_synonym="ME491"
/gene_synonym="OMA81H"
/gene_synonym="TSPAN30"
/db_xref="GeneID:967"
/db_xref="HGNC:HGNC:1692"
/db_xref="MIM:155740"
CDS 42..758
/gene="CD63"
/gene_synonym="LAMP-3"
/gene_synonym="ME491"
/gene_synonym="OMA81H"
/gene_synonym="TSPAN30"
/codon_start=1
/product="CD63 molecule"
/protein_id="AAH13017.1"
/db_xref="GeneID:967"
/db_xref="HGNC:HGNC:1692"
/db_xref="MIM:155740"
/translation="MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTII
QGATPGSLLPVVIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAI
AGYVFRDKVMSEFNNNFRQQMENYPKNNHTASILDRMQADFKCCGAANYTDWEKIPSM
SKNRVPDSCCINVTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEV
LGIVFACCLVKSIRSGYEVM"
BASE COUNT 199 a 185 c 258 g 230 t
ORIGIN
1 ggaacgcgca gccagccttg ggaagcccag gcccggcagc catggcggtg gaaggaggaa
61 tgaaatgtgt gaagttcttg ctctacgtcc tcctgctggc cttttgcgcc tgtgcagtgg
121 gactgattgc cgtgggtgtc ggggcacagc ttgtcctgag tcagaccata atccaggggg
181 ctacccctgg ctctctgttg ccagtggtca tcatcgcagt gggtgtcttc ctcttcctgg
241 tggcttttgt gggctgctgc ggggcctgca aggagaacta ttgtcttatg atcacgtttg
301 ccatctttct gtctcttatc atgttggtgg aggtggccgc agccattgct ggctatgtgt
361 ttagagataa ggtgatgtca gagtttaata acaacttccg gcagcagatg gagaattacc
421 cgaaaaacaa ccacactgct tcgatcctgg acaggatgca ggcagatttt aagtgctgtg
481 gggctgctaa ctacacagat tgggagaaaa tcccttccat gtcgaagaac cgagtccccg
541 actcctgctg cattaatgtt actgtgggct gtgggattaa tttcaacgag aaggcgatcc
601 ataaggaggg ctgtgtggag aagattgggg gctggctgag gaaaaatgtg ctggtggtag
661 ctgcagcagc ccttggaatt gcttttgtcg aggttttggg aattgtcttt gcctgctgcc
721 tcgtgaagag tatcagaagt ggctacgagg tgatgtaggg gtctggtctc ctcagcctcc
781 tcatctgggg gagtggaata gtatcctcca ggtttttcaa ttaaacggat tattttttca
841 gaccgaaaag aaaaaaaaaa aaaaaaaaaa aa
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