LOCUS       BC012996                 967 bp    mRNA    linear   HUM 16-FEB-2007
DEFINITION  Homo sapiens PDZ domain containing 11, mRNA (cDNA clone MGC:3404
            IMAGE:3530647), complete cds.
ACCESSION   BC012996
VERSION     BC012996.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 967)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 967)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-AUG-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Oct 31, 2003 this sequence version replaced BC012996.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 11 Row: a Column: 23
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 40254875.
FEATURES             Location/Qualifiers
     source          1..967
                     /db_xref="H-InvDB:HIT000036067"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:3404 IMAGE:3530647"
                     /tissue_type="Muscle, rhabdomyosarcoma"
                     /clone_lib="NIH_MGC_17"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..967
                     /gene="PDZD11"
                     /gene_synonym="AIPP1"
                     /gene_synonym="PISP"
                     /db_xref="GeneID:51248"
                     /db_xref="HGNC:HGNC:28034"
                     /db_xref="MIM:300632"
     CDS             42..464
                     /gene="PDZD11"
                     /gene_synonym="AIPP1"
                     /gene_synonym="PISP"
                     /codon_start=1
                     /product="PDZ domain containing 11"
                     /protein_id="AAH12996.1"
                     /db_xref="GeneID:51248"
                     /db_xref="HGNC:HGNC:28034"
                     /db_xref="MIM:300632"
                     /translation="MDSRIPYDDYPVVFLPAYENPPAWIPPHERVHHPDYNNELTQFL
                     PRTITLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDF
                     QDIEHSKAVEILKTAREISMRVRFFPYNYHRQKERTVH"
BASE COUNT          269 a          242 c          210 g          246 t
ORIGIN      
        1 gtctgaggtc gctgtggact gcccactggg ccttgcccga gatggacagc cggattcctt
       61 atgatgacta cccggtggtt ttcttgcctg cctatgagaa tcctccagca tggattcctc
      121 ctcatgagag ggtacaccac ccggactaca acaatgagtt gacccagttt ctgccccgaa
      181 ccatcacact gaagaagcct cctggagctc agttgggatt taacatccga ggaggaaagg
      241 cctcccagct aggcatcttc atctccaagg tgattcctga ctctgatgca catagagcag
      301 gactgcagga aggggaccaa gttctagctg tgaatgatgt ggatttccaa gatattgagc
      361 acagcaaggc tgttgagatc ctgaagacag ctcgtgaaat cagcatgcgt gtgcgcttct
      421 ttccctacaa ttatcatcgc caaaaagaga ggactgtgca ctagaaagtt gcagcccaca
      481 gcccttcatg tggactctgt catgacatgc taactagact tcaggggagc cacttctgtt
      541 ttcagcccct ccctggaata gtgagttggg aggatgggga gacagctaac caactgcatt
      601 acccaaacca tattgcactt ttagttccct agttttctag gtgagcttca ttccctgaaa
      661 ggaggatgat gatatctagg cataacctag cctgtgagga acctagttag gaaagacaac
      721 tgacatttat tgaatatcat gcactagtcc cttacatatg tcatatttta attatagaaa
      781 tcagtagcaa aaagaatctt ggggattttc catctgactt ccctggccat cttatcccat
      841 ccttgcacta ccagaagatt catacacttt tgagactcca gtgagacgct gttttcaccc
      901 cttcctcctc ctagcctctc tcccaaaaag taaaacacaa tgctgaagaa aaaaaaaaaa
      961 aaaaaaa
//