LOCUS BC012994 1106 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein
retention receptor 2, mRNA (cDNA clone MGC:3337 IMAGE:3604062),
complete cds.
ACCESSION BC012994
VERSION BC012994.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1106)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1106)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC012994.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8051609.
FEATURES Location/Qualifiers
source 1..1106
/db_xref="H-InvDB:HIT000036065"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3337 IMAGE:3604062"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1106
/gene="KDELR2"
/gene_synonym="ELP-1"
/gene_synonym="ERD2.2"
/db_xref="GeneID:11014"
/db_xref="HGNC:HGNC:6305"
CDS 97..735
/gene="KDELR2"
/gene_synonym="ELP-1"
/gene_synonym="ERD2.2"
/codon_start=1
/product="KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum
protein retention receptor 2"
/protein_id="AAH12994.1"
/db_xref="GeneID:11014"
/db_xref="HGNC:HGNC:6305"
/translation="MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVF
TTRYLDLFTSFISLYNTSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPV
GGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFVISKTGEAETITTHYLFFLGLYRA
LYLVNWIWRFYFEGFFDLIAVVAGVVQTILYCDFFYLYITKVLKGKKLSLPA"
BASE COUNT 266 a 281 c 232 g 327 t
ORIGIN
1 cgccatcttc gccgcttcct ctcaggggcc gccgcctcct gagccgccca gccccggggc
61 cgccgcgctg cgccgaccgc caccgccgcc gccgccatga acattttccg gctgactggg
121 gacctgtccc acctggcggc catcgtcatc ctgctgctga agatctggaa gacgcgctcc
181 tgcgccggta tttctgggaa aagccagctt ctgtttgcac tggtcttcac aactcgttac
241 ctggatcttt ttacttcatt tatttcattg tataacacat ctatgaaggt tatctacctt
301 gcctgctcct atgccacagt gtacctgatc tacctgaaat ttaaggcaac ctacgatgga
361 aatcatgata ccttccgagt ggagtttctg gtggtccctg tgggaggcct ctcattttta
421 gttaatcacg atttctctcc tcttgagatc ctctggacct tctccatcta cctggagtcc
481 gtggctatcc ttccgcagct gtttgtgatc agcaagactg gggaggccga gaccatcacc
541 acccactacc tgttcttcct gggcctctat cgtgctttgt atcttgtcaa ctggatctgg
601 cgcttctact ttgagggctt ctttgacctc attgctgtgg tggccggcgt agtccagacc
661 atcctatact gtgacttctt ctacttgtac attacaaaag tactcaaggg aaagaagctc
721 agtttgccag cataagtgcc aaagaccatc accagcatct gtccttcagg gtgctcggac
781 agaattctta ccacagcaaa ggcataagat gcttgatacg gaaaatcaga aacttaactc
841 ttttgttgca gatagtcatc agtggctctg taaaaacgca gaggaaaaga gccagaaggt
901 ttctgtttaa tgcatcttgc cttatctttt tttattactg tgtacaaaga tttttttaca
961 caaagaaact taatgctgta ttaataaatt cagtgtgtag cttcaattgg gatagttcca
1021 aaagtgaaga ttttgtgagg aataagtgca aatttttttt ttattttaaa aaattctttg
1081 aaactcttaa aaaaaaaaaa aaaaaa
//