LOCUS BC012951 1557 bp mRNA linear HUM 15-FEB-2005
DEFINITION Homo sapiens RNA pseudouridylate synthase domain containing 1, mRNA
(cDNA clone IMAGE:3853655), partial cds.
ACCESSION BC012951
VERSION BC012951.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1557)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1557)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC012951.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: a Column: 24.
FEATURES Location/Qualifiers
source 1..1557
/db_xref="H-InvDB:HIT000087976"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3853655"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1557
/gene="RPUSD1"
/gene_synonym="C16orf40"
/gene_synonym="MGC19600"
/gene_synonym="RLUCL"
/db_xref="GeneID:113000"
CDS <1..574
/gene="RPUSD1"
/gene_synonym="C16orf40"
/gene_synonym="MGC19600"
/gene_synonym="RLUCL"
/codon_start=2
/product="RPUSD1 protein"
/protein_id="AAH12951.2"
/db_xref="GeneID:113000"
/translation="RVGRPRVRCIEGSQGCENPKPSLTDLVVLEHGLYAGDPVSKVLL
KPLTGRTHQLRVHCSALGHPVVGDLTYGEVSGREDRPFRMMLHAFYLRIPTDTECVEV
CTPDPFLPSLDACWSPHTLLQSLDQLVQALRATPDPDPEDRGPRPGSPSALLPGPGRP
PPPPTKPPETEAQRGPCLQWLSEWTLEPDS"
BASE COUNT 256 a 542 c 487 g 272 t
ORIGIN
1 acgcgtgggt cgcccacgcg tccggtgcat cgagggctcg cagggttgtg agaacccaaa
61 gccaagcctc acagatctcg tggttctgga acacgggctg tacgcaggcg atcctgtctc
121 caaagtgctg ctgaagccgc tcacgggccg gacacaccag ctgcgcgtgc actgcagtgc
181 cctgggccac cccgtggtgg gcgacctgac ctacggagaa gtctcgggcc gggaggaccg
241 gccgttcaga atgatgctgc acgctttcta cctgcgcatc cccacggaca ccgagtgtgt
301 ggaggtctgc acgcctgacc ccttcctgcc ctccctggat gcctgctgga gcccccacac
361 actgctgcag tcgctggacc agctcgtgca ggccttacgg gccacccccg accctgaccc
421 cgaggatagg ggccccaggc caggcagccc ctccgcactc ctgcctgggc ccggccggcc
481 tcctccaccc ccaaccaagc cccctgagac tgaggcacag cggggcccct gcctgcagtg
541 gctgtcggag tggacgctgg aaccggacag ctgagagccg tggggctggg gcagggggtg
601 tcagctgcac agcgggactc tagggagatg ggcgagcgag cgtctgctca ctggctctgg
661 ggcctcgagg tgccaggcag catcaggccc actgggttgc cccggccagg cctgcgagga
721 agggctgagg tggggccggc agggggcgcc aggcagccgt gatcacaggt gacgaccgca
781 ccgcggccgt gggactgatg cgggatcccg agggccttcc tgcccacatg ccccgggaga
841 aaccgaggcc cctccctcct cctggaacag cttccggctc tcaagcgtca ccccaggggc
901 gtcagtttta cggactcaag gtcacctcag gaagaggcag ggccaggttt tgggataggc
961 tttgcctcca ggatgggctg ctcctgggcc tggtgagcta ctgcccccaa cctaccctct
1021 agaggggctg ggaagggccg ttctgggctc acctggcctg ggagacccat ctggtccctg
1081 cgtcctctgc ccctcactgc tctgtgcaga tcctgtcgcc ctcagctgcc tcctcccgag
1141 acctaatggt ccctgctggg ctcgagtctg caggcccggc tgcgtgtgcc ttggcctcac
1201 tgtaccagtg gttccctctc tgcccagatt ctgagctcag tgtggtgttt ggtgcacagg
1261 ggttggtcag gggccatggc caaggccctg ccacgcacgc ccatccctca gatccactgt
1321 gagcaccaac ctgctgcagt ctcttgggcc cctgctggca gctctgccac gtcaccgcct
1381 gcctggctcc cacacagcca tgcattgtca ctgcctccgg gaccccagct tgggagctgt
1441 gggtctgcca ggtcccacct cctctgtccc ccatgccaca acctgggctc ctggctacag
1501 cagggctcca gggactccaa ataaatgttc agtgactggc aaaaaaaaaa aaaaaaa
//