LOCUS BC012934 1954 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens forkhead box R2, mRNA (cDNA clone MGC:21658
IMAGE:4707447), complete cds.
ACCESSION BC012934
VERSION BC012934.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC012934.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: l Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38348218.
FEATURES Location/Qualifiers
source 1..1954
/db_xref="H-InvDB:HIT000050569"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21658 IMAGE:4707447"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1954
/gene="FOXR2"
/gene_synonym="FOXN6"
/gene_synonym="MGC21658"
/db_xref="GeneID:139628"
/db_xref="HGNC:HGNC:30469"
CDS 327..1262
/gene="FOXR2"
/gene_synonym="FOXN6"
/gene_synonym="MGC21658"
/codon_start=1
/product="forkhead box R2"
/protein_id="AAH12934.1"
/db_xref="GeneID:139628"
/db_xref="HGNC:HGNC:30469"
/translation="MDLKLKDCEFWYSLHGQVPGLLDWDMRNELFLPCTTDQCSLAEQ
ILAKYRVGVMKPPEMPQKRRPSPDGDGPPCEPNLWMWVDPNILCPLGSQEAPKPSGKE
DLTNISPFPQPPQKDEGSNCSEDKVVESLPSSSSEQSPLQKQGIHSPSDFELTEEEAE
EPDDNSLQSPEMKCYQSQKLWQINNQEKSWQRPPLNCSHLIALALRNNPHCGLSVQEI
YNFTRQHFPFFWTAPDGWKSTIHYNLCFLDSFEKVPDSLKDEDNARPRSCLWKLTKEG
HRRFWEETRVLAFAQRERIQECMSQPELLTSLFDL"
BASE COUNT 550 a 460 c 419 g 525 t
ORIGIN
1 cgcggacgcg tgggttcctc ttgaagtgac tttctgcttc caatcaaagc tcaagaattc
61 cacctaaaaa tgtttttctg ctcaaaagct cttttttatt acttccatgt tttgagcctt
121 gttccagaaa gctgaggttt ctccaggtct gaccactaat cagtgagaca ttggtgcctc
181 tttcttcagt gcttctagca ggcctactga taagctccct agatgagata cactgcataa
241 aaaaatgatg cccaaaggac agctttaagt gcctgctaga tatctgttct ttcagaagtc
301 tctctccacc tatctctcca gtaaagatgg acttaaaact aaaagactgt gaattttggt
361 atagtctcca tggccaggtc ccagggctgc tggactggga catgaggaat gagttatttc
421 tgccttgtac cacagaccag tgctctttag ctgagcaaat ccttgccaaa tacagagtcg
481 gagtaatgaa gcccccagaa atgcctcaga agaggagacc cagtcctgat ggagatggtc
541 ctccctgtga acccaatctg tggatgtggg tggaccccaa tatcctgtgc ccccttggca
601 gccaggaggc cccaaagccc agtggaaaag aggatctgac aaacatttct cctttccctc
661 agcccccaca aaaagacgaa gggtctaact gctcagagga caaagtggta gagtctctgc
721 catcttcctc cagtgagcag tctcctttac agaagcaggg tatccattcc cccagtgact
781 ttgagctcac agaagaggag gctgaggaac cagacgacaa ctccctccag tcccctgaaa
841 tgaaatgtta ccagagccag aaactatggc aaatcaacaa ccaagagaag tcctggcaaa
901 ggccccctct caattgtagc caccttattg ccctagcatt aagaaacaac ccccactgtg
961 gcctcagtgt gcaggagatc tacaatttca cccgacagca tttccccttt ttctggacag
1021 ctccggatgg ctggaagagc accattcatt acaacctctg cttcctggac agctttgaga
1081 aggtgccaga cagccttaag gatgaagata atgcaagacc tcgctcttgc ctttggaagc
1141 tcactaagga ggggcaccgc cgcttttggg aggagactcg tgtcttagcc tttgctcaaa
1201 gggagagaat ccaagagtgc atgagtcagc cagagttgtt gacctctctc tttgatcttt
1261 gaaatgccat tgctcccttt tggaacactg ccttccttac tgtgcctact tatcccctga
1321 cattcattaa tctctaaact tacccagcct ggttggtgcc aagtctgtct ttagctactg
1381 ttacaataat ggtgttaagt aaagttagag gtgggtacag gggagacaga acttaaatcc
1441 aggtggagag tcatggaaag tcgcacgagg agagtggctg ttgttccaaa ttttgagcaa
1501 aggaaaagaa atcctagaaa caatggcata gaaactaagg aaagaagggt gtgttttgtg
1561 aaagaaagga attttgttta tagagagtat tttcacacat gaaagtgaac agtggaatat
1621 aaagcataaa aggcaggatg gagccgagcc atggagaacc tcgagtgcca tgtgaagaga
1681 atttgacttg tgatgaagaa tcaagtttcc ccttctacca ttcatcagct acatctcctt
1741 tttaagtaac ccattttatc cttcagaacc tcacttttct atttctggcc ctggacttct
1801 aagccttgtt tctttgtcat ccaattccaa tattgacaaa taattctaaa cagctacttt
1861 tagtttgtat gtttaacgtc ctgtgaaata ttcctgtatt aaccccaagc cttttgatga
1921 taaagcttta ttttctatta aaaaaaaaaa aaaa
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