LOCUS BC012902 2355 bp mRNA linear HUM 19-APR-2005
DEFINITION Homo sapiens GATA zinc finger domain containing 2A, mRNA (cDNA
clone IMAGE:3864801), partial cds.
ACCESSION BC012902
VERSION BC012902.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2355)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2355)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: j Column: 4.
FEATURES Location/Qualifiers
source 1..2355
/db_xref="H-InvDB:HIT000036025"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3864801"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2355
/gene="GATAD2A"
/gene_synonym="FLJ20085"
/gene_synonym="p66alpha"
/db_xref="GeneID:54815"
CDS <1..802
/gene="GATAD2A"
/gene_synonym="FLJ20085"
/gene_synonym="p66alpha"
/codon_start=2
/product="GATAD2A protein"
/protein_id="AAH12902.2"
/db_xref="GeneID:54815"
/translation="PAPEMNFLPSAANNEFIYLVGLEEVVQNLLETQAGRMSAATVLS
REPYMCAQCKTDFTCRWREEKSGAIMCENCMTTNQKKALKVEHTSRLKAAFVKALQQE
QEIEQRLLQQGTAPAQAKAEPTAAPHPVLKQVIKPRRKLAFRSGEARDWSNGAVLQAS
SQLSRGSATTPRGVLHTFSPSPKLQNSASATALVSRTGRHSERTVSAGKGSATSNWKK
TPLSTGGTLAFVSPSLAVHKSSSAVDRQREYLLDMIPPRSIPQSATWK"
BASE COUNT 510 a 693 c 645 g 507 t
ORIGIN
1 cccagcccca gagatgaact tcctgcccag cgccgccaac aacgagttca tctacctggt
61 cggcctggag gaggtggtgc agaacctact ggagacacaa gcaggcagga tgtcggccgc
121 cactgtgctg tcccgggagc cctacatgtg tgcacagtgc aagacggact tcacgtgccg
181 ctggcgggag gagaagagcg gcgccatcat gtgtgagaac tgcatgacaa ccaaccagaa
241 gaaggcgctc aaggtggagc acaccagccg gctgaaggcc gcctttgtga aggcgctgca
301 gcaggaacag gagattgagc agcggctcct gcagcagggc acggcccctg cacaggccaa
361 ggccgagccc accgctgccc cacaccccgt gctgaagcag gtcataaaac cccggcgtaa
421 gttggcgttc cgctcaggag aggcccgcga ctggagtaac ggggctgtgc tacaggcctc
481 cagccagctg tcccggggtt cggccacgac gccccgaggt gtcctgcaca cgttcagtcc
541 gtcacccaaa ctgcagaact cagcctcggc cacagccctg gtcagcagga ccggcagaca
601 ttctgagaga accgtgagcg ccggcaaggg cagcgccacc tccaactgga agaagacgcc
661 cctcagcaca ggcgggaccc ttgcgtttgt cagcccaagc ctggcggtgc acaagagctc
721 ctcggccgtg gaccgccagc gagagtacct cctggacatg atcccacccc gctccatccc
781 ccagtcagcc acgtggaaat agtgcgagcc aggccccgtg gaagacgggc tccctcctcc
841 cccacctggc ccctggtcta gaaggaccca ctgcaccacc ctccgctggc tcgggaagac
901 accgtgcccg ccccaagagc aagcaccggc catgctgcag aggcaagacc tcaattcttg
961 gctgcaaagt ttcatcaggg ctagggggct ggtgccgcct cataggcaga cgaggatcat
1021 cgctggggga cctttcccgt gggctttctt cctttctctc tttgccttta gtttgcccga
1081 caccagcaga aaagtggacc ttgggggctg gttctgctcc tggccccctt gttcagcccc
1141 tgccggcaca cgggcggctc accctggaca ctgtgatgcg catgggcaag gccagcgccc
1201 ggggcttctg aaccgagcgg ggtgtttcat ttttttgctt ttccctgtct taggctccca
1261 gtctttgact gccttcccat ggcgatctat aagttgaaag attttttttt tttttaatca
1321 cctcatgatg atggagttaa aagtaaaccg tgcagaccct ggggtccctg ttgtacgctg
1381 catcatcccg ctggccctgt gccctggagg gtgggcggct catggtgcca cagcccctgg
1441 cagggacggc cggcccgccc ccgtgactga ctgacagatg cagggatggc cgaggcagcc
1501 ctcgctccag ctgaacgcct ccattgctgc ttgttctgga gacccccgcc cccgcacctt
1561 ccagacttag cagaagaaca aactgaagaa cagacccagc cagagaagca gggattccag
1621 aagctgccca ttaagggaga aggagaggat ccggtcggca gcagccctga gcagaaagct
1681 ggagggggga ctgtcgcggg gtttttctgt tgtggtttat tttattaaat tttttccttt
1741 tttctattca tttcgatgga cgcaatctta agccaccctg gccttgctcc tgggaggtga
1801 gcgtgcacag gtgtgtgcag gtcaggaggt gccgtccagg tgtgcggcga gccgctgcgc
1861 acagatgtca ggatttccgt ttgggtctag tttagaacct gtccttaaac ctaggggttg
1921 ctgtcaggat ttgctttcag actttttttt tttttgtaat tccctttaga gtctacaaaa
1981 atgtttttaa aaggatcagg tctgctttta gtttcatttt tgtttctttc ccgtcccact
2041 ctttaaaaac tggttccgtg aggaaaggca gaagccgttc cgtgtctctt gcaggctggg
2101 ccggcttcat gccagtgcga gggcgtcccg tgcccacgta catacgtatg tctccatgag
2161 ttctgggctc cactggttcc aattgagctc cagccctggt tttcctaccc atgcagttag
2221 ggactttaat ttaatttttt ttttgtaggg ccaccgcctt caaacacaac tgctacaaca
2281 ttctaataaa ggctcattta acccccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2341 aaaaaaaaaa aaaaa
//