LOCUS BC012831 1036 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens exosome component 7, mRNA (cDNA clone MGC:4608
IMAGE:3502185), complete cds.
ACCESSION BC012831
VERSION BC012831.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1036)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1036)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC012831.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725632.
FEATURES Location/Qualifiers
source 1..1036
/db_xref="H-InvDB:HIT000035984"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4608 IMAGE:3502185"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1036
/gene="EXOSC7"
/gene_synonym="EAP1"
/gene_synonym="hRrp42p"
/gene_synonym="KIAA0116"
/gene_synonym="p8"
/gene_synonym="RRP42"
/gene_synonym="Rrp42p"
/db_xref="GeneID:23016"
/db_xref="HGNC:HGNC:28112"
/db_xref="MIM:606488"
CDS 7..882
/gene="EXOSC7"
/gene_synonym="EAP1"
/gene_synonym="hRrp42p"
/gene_synonym="KIAA0116"
/gene_synonym="p8"
/gene_synonym="RRP42"
/gene_synonym="Rrp42p"
/codon_start=1
/product="exosome component 7"
/protein_id="AAH12831.1"
/db_xref="GeneID:23016"
/db_xref="HGNC:HGNC:28112"
/db_xref="MIM:606488"
/translation="MASVTLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSN
TSGSARVKLGHTDILVGVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLG
TEIANTLYRIFNNKSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAAL
FNTRIPRVRVLEDEEGSKDIELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQE
EACSLASLLVSVTSKGVVTCMRKVGKGSLDPESIFEMMETGKRVGKVLHASLQSVLHK
EESLGPKRQKVGFLG"
BASE COUNT 265 a 203 c 304 g 264 t
ORIGIN
1 ggcagcatgg cgtccgtgac gctgagcgag gcggagaagg tgtacatcgt gcatggcgtc
61 caggaagacc tccgtgtgga tggccgtggc tgtgaggact accgatgtgt cgaagtggaa
121 actgatgtgg tgtccaacac tagtgggtcc gccagggtca agctgggtca cacagacatc
181 ttggtgggag tgaaagcaga aatggggacg ccgaagctgg agaaaccaaa tgaaggctac
241 ttggagttct ttgttgactg ttcagccagt gctacccctg aatttgaagg tagaggaggt
301 gatgaccttg gcaccgagat cgctaacacc ctctatcgga tatttaacaa taaaagcagt
361 gtcgacttaa agaccctctg cattagtcct cgggagcact gctgggttct ctatgtggat
421 gtgctgcttc tggaatgtgg tggaaatttg tttgatgcca tttccattgc tgtaaaggct
481 gctctcttca atacaaggat accaagggtt cgagttttgg aggatgaaga ggggtcgaag
541 gacattgaat tgtcagatga cccttatgac tgcatacgac taagtgtgga gaatgtcccc
601 tgcattgtca ctctgtgcaa gattggctat cggcatgtgg tggatgctac tcttcaggag
661 gaggcctgct cgctggccag cttgctggtg tcggtgacca gcaagggagt tgtgacgtgc
721 atgaggaaag tggggaaggg cagcctggac ccagagagca tcttcgagat gatggagact
781 ggcaagcgtg tgggcaaggt actgcatgcc tccttgcaga gtgttctgca caaggaagaa
841 agcctggggc ccaagagaca gaaagttgga ttcctgggat gatttgcaca tcaactgctc
901 aactgtggat tgttttttac ttttcctttt aaaccggttc gtatatattt ttcttcgctg
961 ttacgaattt acagcagcat ttgtacatgt aaaattaaag gctattttct ggtaaaaaaa
1021 aaaaaaaaaa aaaaaa
//