LOCUS BC012780 1698 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 18, mRNA (cDNA
clone IMAGE:3942261), partial cds.
ACCESSION BC012780
VERSION BC012780.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1698)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1698)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC012780.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: f Column: 3.
FEATURES Location/Qualifiers
source 1..1698
/db_xref="H-InvDB:HIT000087937"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3942261"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1698
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
CDS 185..>1698
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/codon_start=1
/product="SFRS18 protein"
/protein_id="AAH12780.1"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
/translation="MWDQGGQPWQQWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQ
REASGQQSMVEQPPGMMPNGQDMSTMESGPNNHGNFQGDSNFNRMWQPEWGMHQQPPH
PPPDQPWMPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGP
VNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPPQNRRERPSSFRDRQRSPIALPVK
QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKEKKATEDAEG
GDGPRLPQRSKFDSDEEEEDTENVEAASSGKVTRSPSPVPQEEHSDPEMTEEEKEYQM
MLLTKMLLTEILLDVTDEEIYYVAKDAHRKATKAPAKQLAQSSALASLTGLGGLGGYG
SGDSEDERSDRGSESSDTDDEELRHRIRQKQEAFWRKEKEQQLLHDKQMEEEKQQTER
VTKEMNEFIHKEQNSLSLLEAREADGDVVNEKKRTPNETTSVLEPKKNKKKKKK"
BASE COUNT 604 a 352 c 414 g 328 t
ORIGIN
1 agtagaagca tcgaaagcgt tggagaggtg ttaccggaac ggcggcgaca agggtgttcc
61 cgaactagag tggggcatac ataatcttgc tgctatgctt cgaagctgta gtctgaatca
121 acctaagttt taaacagaag gtgaacctct gagatagaaa atcaagtata ttttaaaaga
181 agggatgtgg gatcaaggag gacagccttg gcagcagtgg cccttgaacc agcaacaatg
241 gatgcagtca ttccagcacc aacaggatcc aagccagatt gattgggctg cattggccca
301 agcttggatt gcccaaagag aagcttcagg acagcaaagc atggtagaac aaccaccagg
361 aatgatgcca aatggacaag atatgtctac aatggaatct ggtccaaaca atcatgggaa
421 tttccaaggg gattcaaact tcaacagaat gtggcaacca gaatggggaa tgcatcagca
481 acccccacac ccccctccag atcagccatg gatgccacca acaccaggcc caatggacat
541 tgttcctcct tctgaagaca gcaacagtca ggacagtggg gaatttgccc ctgacaacag
601 gcatatattt aaccagaaca atcacaactt tggtggacca cccgataatt ttgcagtggg
661 gccagtgaac cagtttgact atcagcatgg ggctgctttt ggtccaccgc aaggtggatt
721 tcatcctcct tattggcaac caggacctcc aggacctcca gcacctcccc agaatcgaag
781 agaaaggcca tcatcattca gggatcgtca gcgttcacct attgcacttc ctgtgaagca
841 ggagcctcca caaattgacg cagtaaaacg caggactctt cccgcttgga ttcgcgaagg
901 tcttgaaaaa atggaacgtg aaaagcagaa gaaattggag aaagaaagaa tggaacaaca
961 acgttcacaa ttgtccaaaa aagaaaaaaa ggccacagaa gatgctgaag gaggggatgg
1021 ccctcgttta cctcagagaa gtaaatttga tagtgatgag gaagaagaag acactgaaaa
1081 tgttgaggct gcaagtagtg ggaaagtcac cagaagtcca tccccagttc ctcaagaaga
1141 gcacagtgac cctgagatga ctgaagagga gaaagagtat caaatgatgt tgctgacaaa
1201 aatgcttcta acagaaattc tgctggatgt cacagatgaa gaaatttatt acgtagccaa
1261 agatgcacac cgcaaagcaa cgaaagctcc tgcaaaacag ctggcacagt ccagtgcact
1321 ggcttccctc actggactcg gtggactggg tggttatgga tcaggagaca gtgaagatga
1381 gaggagtgac agaggatctg agtcatctga cactgatgat gaagaattac ggcatcgaat
1441 ccggcaaaaa caggaagctt tttggagaaa agaaaaagaa cagcagctat tacatgataa
1501 acagatggaa gaagaaaagc agcaaacaga aagggttaca aaagagatga atgaatttat
1561 ccataaagag caaaatagtt tatcactact agaagcaaga gaagcagacg gtgatgtggt
1621 taatgaaaag aagagaactc caaatgaaac cacatcagtt ttagaaccaa aaaaaaacaa
1681 aaaaaaaaaa aaaaaaaa
//