LOCUS BC012778 4590 bp mRNA linear HUM 16-DEC-2003
DEFINITION Homo sapiens calmodulin regulated spectrin-associated protein 1,
mRNA (cDNA clone IMAGE:3939659), partial cds.
ACCESSION BC012778
VERSION BC012778.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4590)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4590)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC012778.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: e Column: 15.
FEATURES Location/Qualifiers
source 1..4590
/db_xref="H-InvDB:HIT000087936"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3939659"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..4590
/gene="CAMSAP1"
/gene_synonym="DKFZP434F195"
/gene_synonym="DKFZp434G2311"
/gene_synonym="FLJ31228"
/gene_synonym="PRO2405"
/db_xref="GeneID:157922"
CDS <1..2809
/gene="CAMSAP1"
/gene_synonym="DKFZP434F195"
/gene_synonym="DKFZp434G2311"
/gene_synonym="FLJ31228"
/gene_synonym="PRO2405"
/codon_start=2
/product="CAMSAP1 protein"
/protein_id="AAH12778.2"
/db_xref="GeneID:157922"
/translation="GPLSVETAGEVCGGPLALGGFDPFPQGPSTDGFFLHVGRADEDT
EGRLYVSCSKSPNSHDSEPWTLLRQDSDSDVVDIEEAEHDFMGEAHPVVFSRYIGEEE
SAKLQEDMKVKEHEDKDDASGRSSPCLSTASQMSSVSMASGSVKMTSFAERKLHRLNS
CETKSSTSSSQKTTPDASESCPAPLTTWRQKREQSPSQHGKDPASLLASELVQLHMQL
EEKRRAIEAQKKKMEALSARQRLKLGKAAFLHVVKKGKAEAAPPLRPEHFAKEYSQHN
GEDCGDAVSKTEDFLVKEEQREELLHEPQDVDKESLAFAQQHKAKDPVALHELERNKV
ISAALLEDTVGEVVDVNECDLSIEKLNETISTLQQAILKISQQQEQLLMKSPTVPVPG
SKNNSQDHKVKAPVHFVEPLSPTGVAGHRKAPRLGQGRNSRSGRPAELKVPKDRPQGS
SRSKTPTPSVETLPHLRPFPASSHPRTPTDPGLDSALEPSGDPHGKCLFDSYRLHDES
NQRTLTLSSSKDANILSEQMSLKEVLDASVKEVGSSSSDVSGKESVPVEEPLRSRASL
IEVDLSDLKAPDEDGELVSLDGSADLVSEGDQKPGVGFFFKDEQKAEDELAKKRAAFL
LKQQRKAEEARVRKQQLEAEVELKRDEARRKAEEDRVRKEEEKARRELIKQEYLRRKQ
QQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLSRTQSGSSLSLASA
ATTEPESVHSGGTPSQRVESMEALPILSRNPSRSTDRDWETASAASSLASVAEYTGPK
LFKEPSSKSNKPIIHNAISHCCLAGKVNEPHKNSILEELEKCDANHYIILFRDAGCQF
RALYCYYPDTEEIYKLTGTGPKNITKKMIDKLYKYSSDRKQFNLIPAKTMSVSVDALT
IHNHLWQPKRPAVPKKAQTRK"
BASE COUNT 1214 a 1152 c 1245 g 979 t
ORIGIN
1 aggaccactg tcagtggaaa ccgcaggaga ggtctgtggt gggcctctgg cccttggcgg
61 attcgatccg ttcccccagg gaccatccac ggatggcttc ttccttcatg taggcagggc
121 cgatgaagac accgagggaa ggttatatgt tagttgttca aaaagcccca actcccacga
181 ttcagagccg tggactctcc tcaggcagga ttctgactcg gatgtggtgg acatagagga
241 agccgagcac gatttcatgg gtgaggccca tcctgtggtt ttcagcagat acattgggga
301 ggaagagtcg gccaaactgc aggaggacat gaaggtgaag gaacatgaag acaaagatga
361 cgccagcggc cgctcgagcc cctgcctgag cacagcctct cagatgagca gtgtctccat
421 ggcgagtggg agcgtgaaga tgaccagctt tgcggagagg aagctccaca gactcaacag
481 ctgtgagacc aagtccagca ccagcagctc ccagaagacc acgccagatg cgtctgagag
541 ctgcccagcc cctctgacga cgtggaggca gaagagggag cagagtccga gccagcatgg
601 caaggatccc gccagcctcc tggcatctga gctggtacag ctgcacatgc agctggagga
661 gaagcgcagg gccatcgagg cccagaagaa gaagatggag gcgctgtcgg caaggcagcg
721 cctgaagctc ggcaaggctg cattcctgca tgtggtgaag aagggcaagg ccgaggctgc
781 cccacccctc aggccggagc actttgcaaa ggagtactct cagcacaacg gggaggactg
841 tggggacgct gtttccaaaa ccgaagactt tctcgtgaag gaggagcaga gagaggagct
901 ccttcacgag ccacaggatg tggacaaaga gagcctggcc tttgctcagc aacataaagc
961 aaaagaccct gtggctctgc acgagctgga gagaaataag gtgatctccg ctgccctcct
1021 ggaggacact gttggggagg ttgtcgacgt gaatgaatgt gacctttcca tcgagaagct
1081 taacgaaacc atcagtacgc tgcagcaggc catcctgaaa atctctcagc agcaagagca
1141 gcttctgatg aagtccccca cagtcccagt gccaggctct aagaataact cgcaggacca
1201 caaagtgaag gcaccagtcc acttcgtgga gccactctct cccacgggcg tggctggcca
1261 ccgcaaagcc ccccggctgg gtcaaggccg gaattcccgt tccggaaggc cggcggagct
1321 gaaggtccca aaagacaggc cacagggctc ctcccgaagt aaaaccccaa cgcccagtgt
1381 agagacgctc ccgcacttga gacccttccc tgccagcagc caccctcgga cgcccacgga
1441 ccctggcctg gacagtgccc tggagcccag tggtgaccca catgggaagt gtctcttcga
1501 cagttacagg ctccatgatg aaagcaatca gcggacactt actctgtcct cttccaaaga
1561 tgccaacatt ctttcggagc agatgagcct caaagaagtt ctggatgcga gtgtgaagga
1621 ggtggggtcc agctcctcag atgtctcggg aaaagagagc gtccccgtgg aggagcctct
1681 gaggagcagg gccagcctca ttgaagtgga cctctccgac ctgaaggccc ccgacgagga
1741 tggggagctg gtaagcctcg atggctcggc ggaccttgtc agcgaaggcg accagaagcc
1801 gggggtcggc ttcttcttca aggatgaaca gaaagcggaa gatgagctcg ccaagaagcg
1861 ggcggccttc ctcctgaagc agcagcgcaa ggccgaggag gcccgcgtgc gcaagcagca
1921 gctggaagcg gaggtggagc tcaagcgtga cgaagcccgg cgcaaagctg aggaagaccg
1981 ggtgcggaag gaggaggaga aggcgcggcg cgagctcatc aagcaggagt acctgcggag
2041 gaagcagcag cagatcctag aggagcaggg gctcggcaag cccaagtcaa agccgaagaa
2101 gccgcggccg aagtcggtgc accgggaaga gtcgtgcagc gactccggca ccaagtgctc
2161 ctccacccct gataacttga gccggactca gtcaggctcc agcctgtcct tggcctctgc
2221 ggcgacgaca gaacccgaga gcgttcattc cgggggcaca ccctctcagc gagtggaatc
2281 gatggaagcc ctgcccatac tgagccgtaa cccaagcagg agcacagacc gagactggga
2341 gaccgcgtcg gcggcatctt ccctggcctc agtggccgag tacacaggtc ccaagctctt
2401 taaggagccc agtagtaaat caaacaagcc gattattcac aatgccatat cccattgctg
2461 cctggctgga aaagtgaacg aaccccacaa gaattccata ttggaggagc tggagaagtg
2521 tgatgccaat cactacatca tactgtttcg tgatgctggc tgccagttca gggcgcttta
2581 ctgctactat cctgatactg aggaaatcta caaactcact ggcacggggc caaagaacat
2641 caccaagaaa atgatcgaca aactgtataa atacagctca gaccgaaaac agtttaactt
2701 gatcccagcc aaaaccatgt ctgtcagtgt ggacgcactc acaatccaca accacctgtg
2761 gcagcccaag cggcctgcag tgccaaagaa ggcccagact cgtaaatgac cccggtgcag
2821 ctggcgtcca aagggtgacc cagactcgta aatgatgccc ttgtggctgg catccagagg
2881 gtgccacggg gtccttattt attgttttca tctatttggg tacgaagtgt gcaaagtcac
2941 agaccttttg caaagaggtt tctagacagc agaagaaaac ccctctctca gcgctcatct
3001 cacgcagagg atgccaggca gggtgaggat gggggagtag atgccgcttt tgcagtggct
3061 cgcactgctg tggccactgc tgaccactga ggctcccagc ggagggtgtt cacagccagg
3121 tcccgggcca cggagctccc ttacttgaag ttctccttca gcatagatta gacgtgatcc
3181 actttgcttt cttgcttctc acctcgcccc cttgcacatt gcctgacacc ctcatattgg
3241 ccagctgtaa tctcgtgact atgggactga ggctcaatct tggcttgggg tgtttgaatg
3301 tctatagcaa aggaattcat aatgggaaat ctttttcatt tgagaaattg tatgatattt
3361 attggttgtg tctactgcca acatttatat ccaattctaa gatttctgaa aaaaaattct
3421 tatcccttgc tgctcagaaa aagtttacgg aaaacaccag ttcactaaaa gcaccgaaat
3481 ctgcaaagcc tgtcttccgc tagaacaacg tctacaaatg tgaagatgat gacttctggc
3541 acgcggtcat gagggtgggg aatggcacta ggagctgatg tttgcctcat ttaaagtagg
3601 caagccgagc caactgcagc catcattcat taagttttgg gtagtgctct aatggtttgt
3661 tcactttaat aaagacagat tttggtaaag tagaatattt ttcattctga gcatgtttgt
3721 cccaaaaggt gatgcactta agctgacagt cccttcagtg gttttgttag gtcacggctt
3781 gtcctgtctg gattctgcat ctggaagcgc tgcatgctct cagaggagcg tgccgtttcc
3841 cctgtagatg gatacttttg ttttgttgcc tatttaaaaa caattaagtg gttatttgca
3901 gttatttcag aactccaagt aagtggatgg ctttgggttc tttctgcctt ggtcccaatg
3961 gtgttgatgc ttctgtggag cgcggacatt cccaggagca ggtgcgtgcc agccatggct
4021 gccagacact gctgcaactg accagctgcc ggaagattct ggagccacta acattagttt
4081 tgcacatatt ttcttgggag tgttacttga atctatctca aactgcagaa aaaatcaaaa
4141 gatcaataat tgggagaaaa agagacaaat ttaactgtta cataatttta gatagacaaa
4201 aaacatgagt gagtcgtgta cataaggagg gaacatggta cagaaggcta gaaggaatta
4261 taggtcttat tcccctttcc tcagtccttt gaagagaagt acagtctctt gcgattttgt
4321 atatatcgtg ttcgacacag ccgctctctg tcctgtaaat agggaactaa aggctgtatg
4381 atttctcaag tgctgagtta cacagtcctg agtgagcttt ctgttaccat actttcacac
4441 gtgggcttta tttctcactg tatgtttgat atgatattac tgtatttatt ttaagaaagc
4501 actaagatgt aataaagtga tgaactaatt tgctttaaaa aaaaaaaaaa aaaaaaaaaa
4561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//