LOCUS BC012776 1182 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens XRCC6 binding protein 1, mRNA (cDNA clone MGC:16380
IMAGE:3936722), complete cds.
ACCESSION BC012776
VERSION BC012776.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1182)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1182)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC012776.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: d Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792783.
FEATURES Location/Qualifiers
source 1..1182
/db_xref="H-InvDB:HIT000035943"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16380 IMAGE:3936722"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1182
/gene="XRCC6BP1"
/gene_synonym="KUB3"
/db_xref="GeneID:91419"
/db_xref="HGNC:HGNC:29452"
CDS 41..781
/gene="XRCC6BP1"
/gene_synonym="KUB3"
/codon_start=1
/product="XRCC6 binding protein 1"
/protein_id="AAH12776.3"
/db_xref="GeneID:91419"
/db_xref="HGNC:HGNC:29452"
/translation="MAGAPDERRRGPAAGEQLQQQHVSCQVFPERLAQGNPQQGFFSS
FFTSNQKCQLRLLKTLETNPYVKLLLDAMKHSGCAVNKDRHFSCEDCNGNVSGGFDAS
TSQIVLCQNNIHNQAHMNRVVTHELIHAFDHCRAHVDWFTNIRHLACSEVRAANLSGD
CSLVNEIFRLHFGLKQHHQTCVRDRATLSILAVRNISKEVAKKAVDEVFESCFNDHEP
FGRIPHNKTYARYAHRDFENRDRYYSNI"
BASE COUNT 378 a 233 c 249 g 322 t
ORIGIN
1 cctgagccag gaggaagcag cggcgaggtc tgcgggaggc atggcgggag ctccggacga
61 gcgccggcgg ggccccgcgg caggggagca gctgcagcag caacacgtct cttgccaggt
121 cttccccgag cgtctggccc aggggaatcc ccagcaaggg ttcttctcca gcttcttcac
181 cagcaaccag aagtgccagc ttaggctcct gaagacgctg gagacaaatc catatgtcaa
241 acttctgctt gatgctatga aacactcagg ttgtgctgtt aacaaagata gacacttttc
301 ttgcgaagac tgtaatggaa atgtcagtgg aggttttgat gcttcaacat ctcagatagt
361 tttgtgccag aataatatcc ataatcaggc ccatatgaac agagtggtca cacacgagct
421 tattcatgca tttgatcatt gtcgtgccca tgtcgactgg ttcaccaaca tcagacattt
481 ggcgtgctca gaggttcgag ctgctaacct tagtggagac tgctcacttg tcaatgaaat
541 attcaggtta cattttggat taaaacaaca ccaccagact tgtgtgcgag acagagccac
601 tctttctatc ctggctgtta ggaatatcag caaagaagta gctaaaaagg ctgttgatga
661 agtttttgaa tcttgtttca atgaccatga accttttgga aggatcccac ataacaagac
721 ttatgcaaga tatgctcaca gagactttga aaaccgtgat cggtattatt caaatatatg
781 agcacaatga catttttata ttacagagct tccatcatca tgaagaaaaa aaaatttggt
841 tctcaagtga acaaacatat aaaatgtaaa caatccctac aatccagata aaacagagaa
901 gactgtgatt ctagcatatt atcagaaaaa gtaactatgg caaaaaatga aactgcttta
961 aactccaagg cagaaattgt atctttatag ctaaccattt agtaaataaa tacattacat
1021 ttttgtattt tagtcatttg tttttattac atgtgattat tttaaaattt gattatgaaa
1081 cctgtgaagt gtgctcttcc atgatgttga taggtgacca ctgttggtat ttacattaaa
1141 tgtaaagaaa tgtgtactga aaaaaaaaaa aaaaaaaaaa aa
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