LOCUS BC012477 1039 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens AHNAK nucleoprotein, mRNA (cDNA clone IMAGE:4449278),
complete cds.
ACCESSION BC012477
VERSION BC012477.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1039)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1039)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61743953
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1039
/db_xref="H-InvDB:HIT000035832"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4449278"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_89"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1039
/gene="AHNAK"
/gene_synonym="AHNAKRS"
/db_xref="GeneID:79026"
/db_xref="HGNC:HGNC:347"
/db_xref="MIM:103390"
CDS 237..686
/gene="AHNAK"
/gene_synonym="AHNAKRS"
/codon_start=1
/product="AHNAK nucleoprotein"
/protein_id="AAH12477.1"
/db_xref="GeneID:79026"
/db_xref="HGNC:HGNC:347"
/db_xref="MIM:103390"
/translation="MEKEETTRELLLPNWQGSGSHGLTIAQRDDGVFVQEVTQNSPAA
RTGVVKEGDQIVGATIYFDNLQSGEVTQLLNTMGHHTVGLKLHRKGDRSPEPGQTWTR
EVFSSCSSEVFLNTPQPSALECKDQNKQKEASSQAGAVSVSTPNAGL"
BASE COUNT 244 a 288 c 317 g 190 t
ORIGIN
1 agctgctctg ccgcggggac tgcaccgccc gccctgccag acccgcccgg aacggggctc
61 gtcgccgcca gtagccgcag caccgcagcc ttgggcctcg cgccggctat ggccgtgccc
121 tggggctgag ccctcaggtt gtgaccgaga ttcccgacga gagagactga ggggaagaga
181 ggaaggaggg gcgggctcct ggcaaggcat tcgctcctga gcggaatcct gcaaagatgg
241 agaaggagga gacaacccgg gagctgctgc tgcccaactg gcagggtagt ggctcccacg
301 ggctgaccat cgcccagagg gacgacggcg tctttgtgca ggaggtgacg cagaactccc
361 ctgcggcccg cactggggtg gtcaaggagg gggaccagat tgtgggtgcc accatctact
421 ttgacaacct gcagtcgggt gaggtgaccc agctgctgaa caccatgggg caccacacgg
481 tgggcctgaa gctgcaccgc aagggggacc gctctcccga gcctggccag acctggaccc
541 gtgaagtctt cagctcctgc agctctgaag tgtttctgaa cacaccacag ccatcagcac
601 tggaatgcaa agaccagaac aaacagaagg aagccagcag ccaagccggg gcagtttcag
661 tctccacccc aaatgcagga ctgtagaagc ggccaggaag aaaaccaccc cctcttaagg
721 ttgtttttgt gaccgttctt tggagcattg ttctaaaaat gggaaattac atattgctgt
781 gccaagggca acaaacacct gcagttaaag gaataccttc cgcgaggcgg cttttcggag
841 catgcatgtt tatagctcca gccaggccag accgagggct gctgcataag ccctgcttgg
901 tgcatttctt cacttgcaag gggacagagt gtgggcttag gtttgggact agagggggct
961 ttggcaacta tggtgctcag gtgattatcc ttcgctcgtt tatccaataa acatttatca
1021 agcaaaaaaa aaaaaaaaa
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