LOCUS BC012430 3497 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SEH1-like (S. cerevisiae), mRNA (cDNA clone MGC:21489
IMAGE:3865994), complete cds.
ACCESSION BC012430
VERSION BC012430.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3497)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3497)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61743970.
FEATURES Location/Qualifiers
source 1..3497
/db_xref="H-InvDB:HIT000035813"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21489 IMAGE:3865994"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3497
/gene="SEH1L"
/gene_synonym="SEC13L"
/gene_synonym="Seh1"
/gene_synonym="SEH1A"
/gene_synonym="SEH1B"
/db_xref="GeneID:81929"
/db_xref="HGNC:HGNC:30379"
/db_xref="MIM:609263"
CDS 93..1175
/gene="SEH1L"
/gene_synonym="SEC13L"
/gene_synonym="Seh1"
/gene_synonym="SEH1A"
/gene_synonym="SEH1B"
/codon_start=1
/product="SEH1-like (S. cerevisiae)"
/protein_id="AAH12430.1"
/db_xref="GeneID:81929"
/db_xref="HGNC:HGNC:30379"
/db_xref="MIM:609263"
/translation="MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSES
GDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSH
WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS
CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTV
TDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDN
HNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGT
SNPSLGSTIPSLQNSLNGSSAGRKHS"
BASE COUNT 1007 a 617 c 693 g 1180 t
ORIGIN
1 cgggctgcga ggtctggcta ggctacgggc cacgcgccgc cgccgctgcc gccgccactg
61 tcctcttcgg aggcgcgggc ccgacggaaa ccatgtttgt ggctcgcagc atcgcggcgg
121 accacaagga tctcatccac gatgtctctt tcgacttcca cgggcggcgg atggcaacct
181 gctccagcga tcagagcgtt aaggtctggg ataaaagtga aagtggtgat tggcattgta
241 ctgctagctg gaagacacat agtggatctg tatggcgtgt gacatgggcc catcctgaat
301 ttgggcaggt tttggcttcc tgttcttttg accgaacagc tgctgtatgg gaagaaatag
361 taggagaatc aaatgataaa ctgcgaggac agagccactg ggttaaaagg acaactctgg
421 tggatagcag aacatctgtt actgatgtga agtttgctcc caagcacatg ggtcttatgt
481 tagcaacctg ttccgcagat ggtatagtaa gaatctatga ggcaccagat gttatgaatc
541 tcagccagtg gtctttgcag catgagatct catgtaagct aagctgtagt tgtatttctt
601 ggaacccttc aagctctcgt gctcattccc ccatgatcgc cgtaggaagt gatgacagta
661 gccccaacgc aatggccaag gttcagattt ttgaatataa tgaaaacacc aggaaatatg
721 caaaagctga aactcttatg acagtcactg atcctgttca tgatattgca ttcgctccaa
781 atttgggaag atctttccat attctagcaa tagcgaccaa agatgtgaga atttttacat
841 taaagcctgt gaggaaagaa ctgacttcct ctggtgggcc aacaaagttt gaaatccata
901 tagtggctca gttcgataat cataattctc aggtctggcg agtgagttgg aatataacag
961 gaacggtgct agcatcttca ggagatgatg ggtgtgtaag attgtggaaa gctaattata
1021 tggacaattg gaagtgtact ggtattttga aaggtaatgg gagcccagtc aatgggagtt
1081 ctcagcaggg aacctcaaat ccttccctag gttcaactat tccaagtctt cagaattcat
1141 taaatggatc ttctgctggc agaaagcaca gctgagtaca agctaactgg agtaactttg
1201 ctgttttgct gcttgttgca tgcacacagg aatggaaagc gagctccttt tccccttccc
1261 cagcgccgtt tgacctctcc caagatacac cagcagcctg cttactacta aacgcaatcc
1321 aaaaggcctt taaaaataca gtgtatattt tttgtactag tcagtttatt gacactattt
1381 gaaacttttg aaatataaac ggagaggctt tctgttgaga cattgtcacc aaaacaattt
1441 tttgaaatgt tcctgaaact aatttgggtt taaagattaa aagggttgtt accattctta
1501 tctgagtagt tgggaggagg ggaataccac tttagttcat ttggaaaata tagacatatt
1561 tcttttgctt tcttaaaaca gcttaaaatg atgaactttt ataattttaa tttgaagatt
1621 gaataaatat tttttataaa gattgttttg agtgctgatt tgtttacttt ttgtagattt
1681 gctttatcca tgatattcag tacaactctg tcatttcttt gtaatattta aaaaatatta
1741 gtaaaggagt gaattaataa agtagtaata gtaaaatgaa aggaacttga ctgtacagtt
1801 tgtagccagg ttaagcattt ggtattgttt catttacaat ttgggactaa gatggaaaca
1861 ctttttttat aagtttttaa ttcatagtca ctaaagagat aaatgtttct tatatacatt
1921 tgtgtatttt tatggtgtta tttattccat ggcttagctt ccttcaaatc aaaatttgga
1981 cacacactat taagagaagc cattaaaatt ttactaaaat tgtgcatgta aattaattgt
2041 cagcattcca tgtctcaaga ttttcttaat ttagttcgct gtttaaatta attcatgtcc
2101 tgtaaagttc tgaccttgat aacaaagcta taaatattta agtttgctaa tatgcgtaag
2161 tattatcggt aagttacaag atggaagaag aataacagta gggcacagtc attctgtgaa
2221 tccttttact tatcaaaatt tggtagctat tctaaggctt ttgcagaaaa ataagtgttc
2281 aatgtttgta gttcttcaaa agcatgttgc agtagccagc catactatgt gtattcccag
2341 tatcatgtac gcactaaaaa aaatgtgtgc ttgctgctgc tgtgagtgaa ccattgctta
2401 agataaaaaa cttaactaga tctgtaaatg tacagaatag catcagatgt ttctgagaga
2461 ttagaaaatg ttttgaattt ataaaattaa tgtttttctt tgtaacattt atatatattt
2521 tttaacattt taagtttaac agattgtatt cctttcaagt ttctatactt gcttaagcaa
2581 tcttgatttg agtaagggtc ttgatttgtg ctattatgtt ctgttagttt tggcatgaat
2641 atactaaagc tttttttttt ttttctagca tgtgttttct cctctttggt tctctttgta
2701 tttactactt ttctcttttt cttgtgtttt ttttttcctg tttttgtttt gtttggtgtt
2761 ttgttcctgt cttcattgtt tcaggtattt ctttacccct ctggattccc cacgggctgg
2821 atcgagatgg tccagttatg cccagctcct tcctcctcct cctcctcctc tggtagagca
2881 ctcttgcgat gctgacactg ccaacctcca gtatcctcac cctcgcagac gatatctctc
2941 tcggcctctt aatcccttac ctgagaatga agggatttaa aacactgatt taacattgaa
3001 aggccttatt caagtgcttg taaatgcttt catttctggc tgctttttgt ttttcatttt
3061 ctttcagaag atttttctaa cttagggtct gtcttgcatg tattacaacc agaatacagt
3121 gtttggaacc taaatctgtt tgtgcgtctg catcaaagga acatttgctt cactgggtga
3181 taacctttga tgaaatgaga tatgtccaag taacgttaac tgtgaagtta cacacagtag
3241 ctgacttcaa agtgcctgtt ctgtaaattt tattttaaac tgttaccata gtcttaagtt
3301 gtttatgctt tatcagactg gctaatgtga aagcataata ttatgaagtt tattctgcct
3361 tatgagacct taaaaaatgg atttcatttt acaggctaat gttgtaactg actagtatgt
3421 aaaataaatc attcctgtgt ataaagcagc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaa
//