LOCUS BC012392 1136 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aspartylglucosaminidase, mRNA (cDNA clone MGC:9008
IMAGE:3859317), complete cds.
ACCESSION BC012392
VERSION BC012392.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1136)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1136)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: d Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32313568.
FEATURES Location/Qualifiers
source 1..1136
/db_xref="H-InvDB:HIT000035800"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9008 IMAGE:3859317"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1136
/gene="AGA"
/gene_synonym="AGU"
/gene_synonym="ASRG"
/gene_synonym="GA"
/db_xref="GeneID:175"
/db_xref="HGNC:HGNC:318"
/db_xref="MIM:208400"
CDS 52..1092
/gene="AGA"
/gene_synonym="AGU"
/gene_synonym="ASRG"
/gene_synonym="GA"
/codon_start=1
/product="aspartylglucosaminidase"
/protein_id="AAH12392.1"
/db_xref="GeneID:175"
/db_xref="HGNC:HGNC:318"
/db_xref="MIM:208400"
/translation="MARKSNLPVLLVPFLLCQALVRCSSPLPLVVNTWPFKNATEAAW
RALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAV
GDLRRIKNAIGVARKVLEHTTHTLLVGESATTFAQSMGFINEDLSTSASQALHSDWLA
RNCQPNYWRNVIPDPSKYCGPYKPPGILKQDIPIHKETEDDRGHDTIGMVVIHKTGHI
AAGTSTNGIKFKIHGRVGDSPIPGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYM
RRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSE
KNQPTEEKVDCI"
BASE COUNT 323 a 247 c 277 g 289 t
ORIGIN
1 gatcgctggc tgccgggact tttctcgcgc tggtctcttc ggtggtcagg gatggcgcgg
61 aagtcgaact tgcctgtgct tctcgtgccg tttctgctct gccaggccct agtgcgctgc
121 tccagccctc tgcccctggt cgtcaacact tggcccttta agaatgcaac cgaagcagcg
181 tggagggcat tagcatctgg aggctctgcc ctggatgcag tggagagcgg ctgtgccatg
241 tgtgagagag agcagtgtga cggctctgta ggctttggag gaagtcctga tgaacttgga
301 gaaaccacac tagatgccat gatcatggat ggcactacta tggatgtagg agcagtagga
361 gatctcagac gaattaaaaa tgctattggt gtggcacgga aagtactgga acatacaaca
421 cacacacttt tagtaggaga gtcagccacc acatttgctc aaagtatggg gtttatcaat
481 gaagacttat ctaccagtgc ttctcaagct cttcattcag attggcttgc tcggaattgc
541 cagccaaatt attggaggaa tgttatacca gatccctcaa aatactgcgg accctacaaa
601 ccacctggta tcttaaagca ggatattcct atccataaag aaacagaaga tgatcgtggt
661 catgacacta ttggcatggt tgtaatccat aagacaggac atattgctgc tggtacatct
721 acaaatggta taaaattcaa aatacatggc cgtgtaggag actcaccaat acctggagct
781 ggagcctatg ctgacgatac tgcaggggca gccgcagcca ctgggaatgg tgatatattg
841 atgcgcttcc tgccaagcta ccaagctgta gaatacatga gaagaggaga agatccaacc
901 atagcttgcc aaaaagtgat ttcaagaatc cagaagcatt ttccagaatt ctttggggct
961 gttatatgtg ccaatgtgac tggaagttac ggtgctgctt gcaataaact ttcaacattt
1021 actcagttta gtttcatggt ttataattcc gaaaaaaatc agccaactga ggaaaaagtg
1081 gactgcatct aatccatctt tactgtcaac atctgtattt aaaaaaaaaa aaaaaa
//