LOCUS BC012359 2476 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens cleft lip and palate associated transmembrane protein 1, mRNA (cDNA clone MGC:20444 IMAGE:4685026), complete cds. ACCESSION BC012359 VERSION BC012359.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2476) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2476) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: p Column: 1. FEATURES Location/Qualifiers source 1..2476 /db_xref="H-InvDB:HIT000035779" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20444 IMAGE:4685026" /tissue_type="Skin, melanoma, amelanotic" /clone_lib="NIH_MGC_41" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2476 /gene="CLPTM1" /db_xref="GeneID:1209" /db_xref="HGNC:HGNC:2087" /db_xref="MIM:604783" CDS 6..2015 /gene="CLPTM1" /codon_start=1 /product="cleft lip and palate associated transmembrane protein 1" /protein_id="AAH12359.1" /db_xref="GeneID:1209" /db_xref="HGNC:HGNC:2087" /db_xref="MIM:604783" /translation="MAAAQEADGARSAVVAAGGGSSGQVTSNGSIGRDPPAETQPQNP PAQPAPNAWQVIKGVLFRIFIIWAISSWFRRGPAPQDQAGPGGAPRVASRNLFPKDTL MNLHVYISEHEHFTDFNATSALFWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQ NGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKRRRFQKTKNLLTGETEA DPEMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYY PIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQLYAAQSTKSPWNFLGDEL YEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLS VRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDREHRVAG IFPRLSFKDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWYSWVL SMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVM YRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEDPTAAAPVAEVPTAAGALTPT PAPTTTTATREEASTSLPTKPTQGASSASEPQEAPPKPAEDKKKD" BASE COUNT 507 a 821 c 665 g 483 t ORIGIN 1 ggaagatggc ggcggcgcag gaggcggacg gggcccgcag cgccgtggtg gcggccgggg 61 gaggcagctc cggtcaggtg accagcaatg gcagcatcgg gagggacccg ccagcggaga 121 cccagcctca gaacccaccg gcccagccgg cacccaatgc ctggcaggtc atcaaaggtg 181 tgctgtttag gatcttcatc atctgggcca tcagcagttg gttccgccga gggccggccc 241 ctcaggacca ggcgggcccc ggaggagccc cacgcgtcgc cagccgcaac ctgttcccca 301 aagacacttt aatgaacctg catgtgtaca tctcagagca cgagcacttt acagacttca 361 acgccacgtc ggcactcttc tgggaacagc acgatcttgt gtatggcgac tggactagcg 421 gcgagaactc agacggctgc tacgagcact ttgctgagct cgatatccca cagagcgtcc 481 agcagaacgg ctccatctac atccacgttt acttcaccaa gagtggcttc cacccagacc 541 cccggcagaa ggccctgtac cgccggcttg ccacagtcca catgtcccgg atgatcaaca 601 aatacaagcg cagacgattt cagaaaacca agaacctgct gacaggagag acagaagcgg 661 acccagaaat gatcaagagg gctgaggact atgggcctgt ggaggtgatc tcccattggc 721 accccaacat caccatcaac atcgtggacg accacacgcc gtgggtgaag ggcagtgtgc 781 cccctcccct ggatcaatat gtgaagttcg acgccgtgag cggtgactac tatcccatca 841 tctacttcaa tgactactgg aacctgcaga aggactacta ccccatcaac gagagcctgg 901 ccagcctgcc gctccgcgtc tccttctgcc cgctctcgct ttggcgctgg cagctctatg 961 ctgcccagag caccaagtcg ccctggaact tcctgggtga tgagttgtac gagcagtcag 1021 atgaggagca ggactcggtg aaggtggccc tgctggagac caacccctac ctgctggcgc 1081 tcaccatcat cgtgtctatc gttcacagtg tcttcgagtt cctggccttc aagaatgata 1141 tccagttctg gaacagccgg cagtccctgg agggcctgtc cgtgcgctcc gtcttcttcg 1201 gcgttttcca gtcattcgtg gtcctcctct acatcctgga caacgagacc aacttcgtgg 1261 tccaggtcag cgtcttcatt ggggtcctca tcgacctctg gaagatcacc aaggtcatgg 1321 acgtccggct ggaccgagag cacagggtgg caggaatctt cccccgccta tccttcaagg 1381 acaagtccac gtatatcgag tcctcgacca aagtgtatga tgatatggca ttccggtacc 1441 tgtcctggat cctcttcccg ctcctgggct gctatgccgt ctacagtctt ctgtacctgg 1501 agcacaaggg ctggtactcc tgggtgctca gcatgctcta cggcttcctg ctgaccttcg 1561 gcttcatcac catgacgccc cagctcttca tcaactacaa gctcaagtct gtggcccacc 1621 ttccctggcg catgctcacc tacaaggccc tcaacacatt catcgacgac ctgttcgcct 1681 ttgtcatcaa gatgcccgtt atgtaccgga tcggctgcct gcgggacgat gtggttttct 1741 tcatctacct ctaccaacgg tggatctacc gcgtcgaccc cacccgagtc aacgagtttg 1801 gcatgagtgg agaagacccc acagctgccg cccccgtggc cgaggttccc acagcagcag 1861 gggccctcac gcccacacct gcacccacca cgaccaccgc caccagggag gaggcctcca 1921 cgtccctgcc caccaagccc acccaggggg ccagctctgc cagcgagccc caggaagccc 1981 ctccaaagcc agcagaggac aagaaaaagg attagtcgag actggtcctc acctgctccg 2041 gctcctggcg accactaccc ctgcgtcccg gccccctcgc ctcccctccc tgtcgccctt 2101 tccctggaca gatcaggccg gggcggtggg aggcccgcct caggtcaggg cccagcgtgt 2161 gacgtagggg ccggggcagg ccagggtttg tttgtggagg cgctgtctgt ccctctgtcc 2221 ctctgtgttt ccagccatct cgccctgcca gcccagcacc actgggaatc atggtgaagc 2281 tgatgcagcg ttgccgaggg ggtgggttgg gcgggggtgg ggccgggccc ccctacggga 2341 tgcccacggc cgttcatcat cttgtccctc gtccccctac cacactcccc ctcctagacc 2401 gccgcccttt aacacagtct ggatttaata aattcatatg ggtgtttaac ttaaactcaa 2461 aaaaaaaaaa aaaaaa //