LOCUS BC012349 3150 bp mRNA linear HUM 08-DEC-2006 DEFINITION Homo sapiens cyclin F, mRNA (cDNA clone MGC:20163 IMAGE:4634116), complete cds. ACCESSION BC012349 VERSION BC012349.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3150) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3150) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: j Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4502620. FEATURES Location/Qualifiers source 1..3150 /db_xref="H-InvDB:HIT000035770" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20163 IMAGE:4634116" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3150 /gene="CCNF" /gene_synonym="FBX1" /gene_synonym="FBXO1" /db_xref="GeneID:899" /db_xref="HGNC:HGNC:1591" /db_xref="MIM:600227" CDS 13..2373 /gene="CCNF" /gene_synonym="FBX1" /gene_synonym="FBXO1" /codon_start=1 /product="cyclin F" /protein_id="AAH12349.1" /db_xref="GeneID:899" /db_xref="HGNC:HGNC:1591" /db_xref="MIM:600227" /translation="MGSGGVVHCRCAKCFCYPTKRRIRRRPRNLTILSLPEDVLFHIL KWLSVEDILAVRAVHSQLKDLVDNHASVWACASFQELWPSPGNLKLFERAAEKGNFEA AVKLGIAYLYNEGLSVSDEARAEVNGLKASRFFSLAERLNVGAAPFIWLFIRPPWSVS GSCCKAVVHESLRAECQLQRTHKASILHCLGRVLSLFEDEEKQQQAHDLFEEAAHQGC LTSSYLLWESDRRTDVSDPGRCLHSFRKLRDYAAKGCWEAQLSLAKACANANQLGLEV RASSEIVCQLFQASQAVSKQQVFSVQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLT VECVDRYLRRRLVPRYRLQLLGIACMVICTRFISKEILTIREAVWLTDNTYKYEDLVR MMGEIVSALEGKIRVPTVVDYKEVLLTLVPVELRTQHLCSFLCELSLLHTSLSAYAPA RLAAAALLLARLTHGQTQPWTTQLWDLTGFSYEDLIPCVLSLHKKCFHDDAPKDYRQV SLTAVKQRFEDKRYGEISQEEVLSYSQLCAALGVTQDSPDPPTFLSTGEIHAFLSSPS GRRTKRKRENSLQEDRGSFVTTPTAELSSQEETLLGSFLDWSLDCCSGYEGDQESEGE KEGDVTAPSGILDVTVVYLNPEQHCCQESSDEEACPEDKGPQDPQALALDTQIPATPG PKPLVRTSREPGKDVTTSGYSSVSTASPTSSVDGGLGALPQPTSVLSLDSDSHTQPCH HQARKSCLQCRPPSPPESSVPQQQVKRINLCIHSEEEDMNLGLVRL" BASE COUNT 700 a 908 c 914 g 628 t ORIGIN 1 gcgagcgcgg cgatggggag cggcggcgtg gtccactgta ggtgtgccaa gtgtttctgt 61 tatcctacaa agcgaagaat aaggaggagg ccccgaaacc tgaccatctt gagtctcccc 121 gaagatgtgc tctttcacat cctgaaatgg ctttctgtag aggacatcct ggccgtccga 181 gctgtacact cccagctgaa ggacctggtg gacaaccacg ccagtgtgtg ggcatgtgcc 241 agcttccagg agctgtggcc gtctccaggg aacctgaagc tctttgaaag ggctgctgaa 301 aaggggaatt tcgaagctgc tgtgaagctg ggcatagcct acctctacaa tgaaggcctg 361 tctgtgtctg atgaggcccg cgcagaagtg aatggcctga aggcctctcg cttcttcagt 421 ctcgctgagc ggctgaatgt gggtgccgca cctttcatct ggctcttcat ccgccctccg 481 tggtcggtga gcggaagctg ctgcaaggcc gtggttcacg agagcctcag ggcagagtgc 541 cagctgcaga ggactcacaa agcatccata ttgcactgct tgggcagagt gctgagtctg 601 ttcgaggatg aggagaagca gcagcaggcc catgacctgt ttgaggaggc tgctcatcag 661 ggatgtctga ccagctccta cctcctctgg gaaagcgaca ggaggacaga tgtgtcagat 721 cctgggcgat gcctccacag cttccgaaaa ctcagggact acgctgccaa aggctgctgg 781 gaagcgcagc tgtctttagc caaagcctgt gcaaatgcaa accagcttgg actggaggtg 841 agagcttcca gtgagatcgt ctgccagcta tttcaggctt cccaggctgt cagtaaacaa 901 caagtcttct ccgtgcagaa gggactcaat gacacaatga ggtacattct gatcgactgg 961 ctggtggaag ttgccaccat gaaggacttc acaagcctgt gcctgcacct gaccgtggag 1021 tgtgtggacc ggtacctgcg gaggaggctg gtgccgcggt acaggctcca gctgctgggc 1081 atcgcctgca tggtcatctg cacccggttt atcagtaaag agatcctgac catccgggag 1141 gccgtatggc tcacggacaa cacttacaag tacgaggacc tggtgagaat gatgggcgag 1201 atcgtctccg ccttggaagg gaagattcga gtccccactg tggtggatta caaggaggtc 1261 ctgctgacgc tagtccctgt ggagctgaga acccagcacc tgtgcagctt cctctgcgag 1321 ctctccctgc tgcacaccag cctgtccgcc tacgccccag cccgcctggc tgccgcagcc 1381 ctgctcctgg ccagactgac gcacgggcag acacagccct ggaccactca gctgtgggac 1441 ctcaccggat tctcctatga agacctcatt ccctgcgtct tgagcctcca taagaagtgc 1501 ttccatgatg acgcccccaa ggactacagg caagtctctc tgaccgccgt gaagcagcgg 1561 tttgaggaca agcgctatgg agaaatcagc caggaagagg tgctgagcta cagccagttg 1621 tgtgctgcat taggagtgac acaagacagc cccgaccccc cgactttcct cagcacaggg 1681 gagatccacg ccttcctcag ctctccctcg gggcggagaa ccaaacggaa gcgggagaac 1741 agcctccagg aagacagagg cagcttcgtt accaccccca ctgcggagct gtccagccag 1801 gaggagacgc tgctgggcag cttcctcgac tggagcctgg actgctgctc tggctatgaa 1861 ggcgaccagg agagtgaggg cgagaaggag ggcgacgtga cagctcccag cggcatcctc 1921 gatgtcaccg tggtctacct gaacccagaa cagcattgct gccaggaatc cagtgatgag 1981 gaggcttgtc cagaggacaa gggaccccag gacccacagg cactggcgct ggacacccag 2041 atccctgcaa cccctggacc caaacccctg gtccgcacca gccgggagcc agggaaggac 2101 gtcacgacct cagggtactc ctccgtcagc accgcaagtc ccacaagctc cgtggacggt 2161 ggcttggggg ccctgcccca acctacctca gtgctgtccc tggacagtga ctcgcacaca 2221 cagccctgcc accatcaggc caggaagtca tgtttacagt gtcgtccccc aagtcccccg 2281 gagagcagtg ttccccagca acaggtgaag cggataaacc tatgcataca cagtgaggag 2341 gaggacatga acctgggcct tgtgaggctg taagtgtgtc agcacatttg ccgcagtgga 2401 tgtgtactga gggggctgga ggcgaagggt gggagcatag cataggaacg ctgcatagac 2461 catggaggcc tttgcgcaga gagcagagag gatgacttgc ggccaccaag tttctgtctc 2521 cgcgggagtc ccgtgcaagc catcagaatg ttgaaatgag ggtgaagagc tcagatccct 2581 ctctttggaa agtttagcct ggaagcagtt ggccacactg tgtggagggc acctctctgt 2641 cccttccgtg tctcactgtc tctggaagct tcagcccatg tgtgtcctgg tgttcccagc 2701 cccaccagag ccccgtgccg ggagctgaca gctttcacgc ttaaggcacg tgtgacctgg 2761 gtagtcagac accacttgag cccctgccca catctgctgg tttggggctt cagtggggag 2821 ctgacagctg tgagcacacc actgtcccct catccacctc ggcctgcatg gggcacccac 2881 ttccttctgg gtggggcttc catggtaagg gggcctgcgt ccctgcacac tgcgaggact 2941 gccttggcca caggcccact ccctacgaca cgtgactcgt tttagagctc tgtcccagag 3001 gcgttcgtat gtgacccaca gatggcgtca atgtgaacac ctctctttgt gctgaatttc 3061 tgggccattc ttttcctgtc ttatttctaa atttccttct tccaagatga aaacaaaaaa 3121 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //