LOCUS BC012332 3418 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens Fas (TNFRSF6) binding factor 1, mRNA (cDNA clone
IMAGE:4562904), partial cds.
ACCESSION BC012332
VERSION BC012332.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3418)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3418)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: f Column: 2.
FEATURES Location/Qualifiers
source 1..3418
/db_xref="H-InvDB:HIT000035761"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4562904"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3418
/gene="FBF1"
/gene_synonym="Alb"
/gene_synonym="FBF-1"
/db_xref="GeneID:85302"
/db_xref="HGNC:HGNC:24674"
CDS <1..2470
/gene="FBF1"
/gene_synonym="Alb"
/gene_synonym="FBF-1"
/codon_start=2
/product="FBF1 protein"
/protein_id="AAH12332.2"
/db_xref="GeneID:85302"
/db_xref="HGNC:HGNC:24674"
/translation="ADSGADPKGEPGSKQSPPMASSPIQPRKGGADWLGLKDEDLDLF
PASPTREAHRESSVPVTPSVPPPASQHSTPAGLPPSRAKPPTEGAGSPAKASQASKLR
ASKEEKEDWLSHALSRKKSQGLAREQHAGTSEGLHLAGTAGHPPSGSQPLTSTQGLEH
AAAGGSSGTTARERPCVRPGVSGSPVTQNHAASALPTGSPKRGTAPGDLSATEPATCF
PSTQKPTEPSVPVQPLLPESLARSLLPSTEYQKQLLAAQVQLQCSPAELQAELLHSQA
RLAELEAQVRKLELERAQHELLLGSLQQQHQADLELIESAHRIRIKVLETSYQQREER
LRRENEELSARYLSQCQEAEQARAELTAQHQRRLVAIAQEKDQEMERLRELQRASILD
MRRDHEEQLQRLKLLKDREVDAATSATSHTRSLNSIIHQMEKFSSSLHELSSRVEASH
LTTSQERELGIRQRDEQLRALQERLGQQQRDMEEERSRQQEVIGKMEARLNEQSRLLE
QERWRVTAEQSKAESMQRALEEQRKVTAQQMAMERAELERAKSALLEEQKSVMLKCGE
ERRRLAAEWAEFSAQQKLSKERAEREAERALQVDTQREGTLISLAKEQAELKIRASEL
RAEEKQLAAERAALEQERQELRLEKERINATALRVKLRAEEVESMSKVASEKYEEGER
ALREAQQVQAEQQARLQAVQQQQERLRKQEQHMHQEHLSLAQQRLQLDRARQDLPSSL
VGLFPRAQGPAASSQSALMPPAPTTRWCSQPPTGLDPSPLHLHARLALLRHMAEQDRD
FLENEQFFLETLKKGSYNLTSHSA"
BASE COUNT 766 a 1049 c 1087 g 516 t
ORIGIN
1 cgcagacagt ggcgcagacc ccaagggaga accaggctcc aaacagagcc ctccaatggc
61 ttccagcccc atccagccca ggaagggagg agctgactgg ttgggcctca aggacgagga
121 cttggacctg ttccctgcct cacccaccag agaggcccat cgggaaagtt cagtgcctgt
181 cacgccctca gtgcctcctc ctgcgagcca gcactccacg ccagctgggc tgcccccctc
241 cagggcaaag ccaccaactg aaggtgcagg gtcccctgcc aaagccagcc aggcttccaa
301 gctgcgagcc tccaaggagg agaaagagga ctggctgagc catgccctgt ctcggaagaa
361 gtcccaaggc ctggccagag agcagcatgc tgggacctct gagggcctgc atttggcggg
421 gacagcgggc catccccctt ctggcagcca acctctcacc agcacacaag ggcttgagca
481 cgcagctgct ggagggagtt ctggaacaac tgcacgagaa agaccgtgtg tcaggcctgg
541 tgtctcgggg tcccctgtga ctcagaacca tgccgcctca gcactcccta caggttcccc
601 aaagagggga acagcccctg gagacctctc agccactgag cctgccacgt gtttcccgag
661 cacccagaaa cccacagagc cttccgtgcc cgtccagccc ctgctcccag agtccctggc
721 ccggagcctg ctgccgagca cagaatacca gaagcagctc ctggcagcac aggtgcaact
781 tcagtgcagc cccgctgagc tccaggccga gctgctgcat agccaggccc ggctggcaga
841 gctggaggcc caggtgcgga agctggagct agaacgggcc cagcatgagc tgctgctggg
901 gagtctgcag cagcagcacc aggcagacct ggagctcatc gagagtgcac acagaatccg
961 catcaaggtg ctagaaacat cgtaccagca acgggaggag cggctccgga gagagaacga
1021 agagctgtca gctcggtatc tgtcgcagtg ccaggaggcc gaacaggccc gtgctgagct
1081 tacggcccag caccagcggc gcttggtggc catagcgcag gagaaggacc aggaaatgga
1141 gcggctccgg gagctgcagc gggcgtccat cctagacatg cgcagagacc acgaggagca
1201 gctgcagcgg ctaaagctgc tgaaggaccg agaggtcgat gcggccacca gtgccacctc
1261 ccacacgcgg tccctgaata gcatcatcca ccagatggag aagttctcca gcagcctgca
1321 cgagttgtcc tcccgcgtgg aggcctcgca cctcaccacc tcccaggagc gggagctggg
1381 gatccggcag cgtgacgagc agctgcgggc actgcaggag cggctgggcc agcagcagcg
1441 ggacatggag gaggagcgga gccggcaaca ggaggtcatc gggaagatgg aggcacggct
1501 gaatgagcag agccggctgc tggagcagga acgctggcgg gtgactgccg agcagtccaa
1561 ggcggagtcc atgcagcgcg ccctagagga gcaaaggaag gtcacggccc agcagatggc
1621 catggaaagg gcggagctgg aacgggccaa gagcgccttg ctggaggagc agaagtctgt
1681 catgctcaag tgcggggagg agcggcggcg cctggctgcc gagtgggcgg agttctccgc
1741 gcagcaaaag ctgagtaagg agcgggccga gcgcgaggcc gagcgggcat tgcaggtgga
1801 cacccagcgg gagggcaccc tcatcagcct ggccaaggag caggctgagc tgaagatcag
1861 ggccagcgag ctccgggccg aggagaagca gctggcagcg gagagagcag ccctggagca
1921 ggagcggcag gagctgcggc tggagaagga gaggatcaac gccaccgccc tgcgtgtcaa
1981 gctccgcgcc gaggaggtgg agagcatgag caaggtggcc tccgagaagt acgaggaggg
2041 ggagcgggca ttgcgcgagg cccagcaggt gcaggcagag cagcaggccc ggttgcaggc
2101 ggtgcagcaa cagcaggagc ggctgcggaa gcaggagcag cacatgcacc aggagcatct
2161 gagtctggcc cagcagaggc tgcaactgga ccgcgcacga caggacctgc cctctagcct
2221 cgtgggtctg ttccccaggg cccagggccc tgcagcctcc agccagagtg ccctcatgcc
2281 tcctgctccc accacccgtt ggtgcagcca gccgccaact ggcctggacc ccagcccctt
2341 gcacctccat gccaggctgg cactgctgag gcacatggca gagcaggacc gtgacttctt
2401 ggagaatgaa cagttcttcc tggagaccct gaagaaaggg tcctacaatt tgacatctca
2461 ttcagcctga gtgggacccc agccgattcc ccaacagagg gttcggaccc cagaactgtc
2521 ctgttcctcc ggctgcctcc atggaggcag tgcctgggga ggattctgag atgcttgagg
2581 cctgatgaca gctcttccgt ggacagggtg caagtgcatc ctttccaaat gtgccagccc
2641 ggggcagccc ctgcctctgg ggctctgtgg tgtaggctat cttaccatgg ctttggctgc
2701 cctgccccaa agccattggc ttggatctga gggtctgagt tggcagcaag gacccccagc
2761 tctcactggg ctctgtgggc tccccctggg ctctgtgggc tccccctgct ccacaggtag
2821 actgttgtgg gctctttttg cctgggcctc ttctgaggca ggagctttct tgagggatgc
2881 cacaaacagc cttccctact ccctgccaga gcagttccct ccctgatgag ctggagaagg
2941 gccctctggc ctcctgacag tacagggagg gcaccagcta gatcctccct tgtggtgtga
3001 gatgttcctg gaactcagcc aggccctcct cctcctgggc ttgcccagag cccccaccct
3061 attcccagca ttgcccgaag gaccaaccag tttgggtgaa cagtggcctc ctcagcttcc
3121 tccccatctg ggtgccccac cggcggcgga gggagctgtg gcgatggtgg ggtgtgggga
3181 gggacgagga gggaagcctc tgtgctgctc acctgcccaa agcccagctc agcgggtacg
3241 cagtggaggc gacaaggaac ccatcacaac tacagaggtt tctctgatcc tcctccactc
3301 ccgctgcttc aacttgacta agcttaaaaa aactgctttt gccatgaaaa aaaaaaaaaa
3361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//