LOCUS BC012325 2811 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens solute carrier family 22 (organic cation/carnitine transporter), member 5, mRNA (cDNA clone MGC:20139 IMAGE:4548603), complete cds. ACCESSION BC012325 VERSION BC012325.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2811) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2811) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: a Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24497491. FEATURES Location/Qualifiers source 1..2811 /db_xref="H-InvDB:HIT000035756" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20139 IMAGE:4548603" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_18" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2811 /gene="SLC22A5" /gene_synonym="OCTN2" /gene_synonym="OCTN2VT" /db_xref="GeneID:6584" /db_xref="HGNC:HGNC:10969" /db_xref="MIM:603377" CDS 172..1845 /gene="SLC22A5" /gene_synonym="OCTN2" /gene_synonym="OCTN2VT" /codon_start=1 /product="solute carrier family 22 (organic cation/carnitine transporter), member 5" /protein_id="AAH12325.1" /db_xref="GeneID:6584" /db_xref="HGNC:HGNC:10969" /db_xref="MIM:603377" /translation="MRDYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSSVFLIA TPEHRCRVPDAANLSSAWRNHTVPLRLRDGREVPHSCRRYRLATIANFSALGLEPGRD VDLGQLEQESCPDGWEFSQDVYLSTIVTEWNLVCEDDWKAPLTISLFFVGVLLGSFIS GQLSDRFGRKNVLFVTMGMQTGFSFLQIFSKNFEMFVVLFVLVGMGQISNYVAAFVLG TEILGKSVRIIFSTLGVCIFYAFGYMVLPLFAYFIRDWRMLLVALTMPGVLCVALWWF IPESPRWLISQGRFEEAEVIIRKAAKANGIVVPSTIFDPSELQDLSSKKQQSHNILDL LRTWNIRMVTIMSIMLWMTISVGYFGLSLDTPNLHGDIFVNCFLSAMVEVPAYVLAWL LLQYLPRRYSMATALFLGGSVLLFMQLVPPDLYYLATVLVMVGKFGVTAAFSMVYVYT AELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLF LPESFGTPLPDTIDQMLRVKGMKHRKTPSHTRMLKDGQERPTILKSTAF" BASE COUNT 632 a 743 c 726 g 710 t ORIGIN 1 ccgcggcagg accaaggcgg cggtgtcagc tcgcgagcct accctccgcg gacggtcttg 61 ggtcgcctgc tgcctggctt gcctggtcgg cggcgggtgc cccgcgcgca cgcgcaaagc 121 ccgccgcgtt ccccgacccc aggccgcgct ctgtgggcct ctgagggcgg catgcgggac 181 tacgacgagg tgaccgcctt cctgggcgag tgggggccct tccagcgcct catcttcttc 241 ctgctcagcg ccagcatcat ccccaatggc ttcaccggcc tgtcctccgt gttcctgata 301 gcgaccccgg agcaccgctg ccgggtgccg gacgccgcga acctgagcag cgcctggcgc 361 aaccacactg tcccactgcg gctgcgggac ggccgcgagg tgccccacag ctgccgccgc 421 taccggctcg ccaccatcgc caacttctcg gcgcttgggc tggagccggg gcgcgacgtg 481 gacctggggc agctggagca ggagagctgt ccggatggct gggagttcag tcaggacgtc 541 tacctgtcca ccattgtgac cgagtggaac ctggtgtgtg aggacgactg gaaggcccca 601 ctcacaatct ccttgttctt cgtgggtgtg ctgttgggct ccttcatttc agggcagctg 661 tcagacaggt ttggccggaa gaatgtgctg ttcgtgacca tgggcatgca gacaggcttc 721 agcttcctgc agatcttctc gaagaatttt gagatgtttg tcgtgctgtt tgtccttgta 781 ggcatgggcc agatctccaa ctatgtggca gcatttgtcc tggggacaga aattcttggc 841 aagtcagttc gtataatatt ctctacgtta ggagtgtgca tattttatgc atttggctac 901 atggtgctgc cactgtttgc ttacttcatc cgagactggc ggatgctgct ggtggcgctg 961 acgatgccgg gggtgctatg cgtggcactc tggtggttca tccctgagtc cccccgatgg 1021 ctcatctctc agggacgatt tgaagaggca gaggtgatca tccgcaaggc tgccaaagcc 1081 aatgggattg ttgtgccttc cactatcttt gacccgagtg agttacaaga cctaagttcc 1141 aagaagcagc agtcccacaa cattctggat ctgcttcgaa cctggaatat ccggatggtc 1201 accatcatgt ccataatgct gtggatgacc atatcagtgg gctattttgg gctttcgctt 1261 gatactccta acttgcatgg ggacatcttt gtgaactgct tcctttcagc gatggttgaa 1321 gtcccagcat atgtgttggc ctggctgctg ctgcaatatt tgccccggcg ctattccatg 1381 gccactgccc tcttcctggg tggcagtgtc cttctcttca tgcagctggt acccccagac 1441 ttgtattatt tggctacagt cctggtgatg gtgggcaagt ttggagtcac ggctgccttt 1501 tccatggtct acgtgtacac agccgagctg tatcccacag tggtgagaaa catgggtgtg 1561 ggagtcagct ccacagcatc ccgcctgggc agcatcctgt ctccctactt cgtttacctt 1621 ggtgcctacg accgcttcct gccctacatt ctcatgggaa gtctgaccat cctgacagcc 1681 atcctcacct tgtttctccc agagagcttc ggtaccccac tcccagacac cattgaccag 1741 atgctaagag tcaaaggaat gaaacacaga aaaactccaa gtcacacaag gatgttaaaa 1801 gatggtcaag aaaggcccac aatccttaaa agcacagcct tctaacatcg cttccagtaa 1861 gggagaaact gaagaggaaa gactgtcttg ccagaaatgg ccagcttgtg cagactccga 1921 gtccttcagt gacaaaggcc tttgctgttt gtcctcttga cctgtgtctg acttgctcct 1981 ggatgggcac ccacactcag aggctacata tggccctaga gcaccacctt cctctaggga 2041 cactggggct acctacagac aacttcatct aagtcctaac tattacaatg atggactcag 2101 cacctccaaa gcagttaatt tttcactaga accagtgaga tctggaggaa tgtgagaagc 2161 atatgctaaa tgtacatttt aattttagac tacttgaaaa ggcccctaat aaggctagag 2221 gtctaagtcc cccacccctt tccccactcc cctctagtgg tgaactttag aggaaaagga 2281 agtaattgca caaggagttt gattcttacc ttttctcagt tacagaggac attaactgga 2341 tcattgcttc cccagggcag gagagcgcag agctagggaa agtgaaaggt aatgaagatg 2401 gagcagaatg agcagatgca gatcaccagc aaagtgcact gatgtgtgag ctcttaagac 2461 cactcagcat gacgactgag tagacttgtt tacatctgat caaagcactg ggcttgtcca 2521 ggctcataat aaatgctcca ttgaatctac tattcttgtt ttccactgct gtggaaacct 2581 ccttgctact atagcgtctt atgtatggtt taaaggaaat ttatcaggtg agagagatga 2641 gcaacgttgt cttttctctc aaagctgtaa tgtgggtttt gttttactgt ttatttgttt 2701 gttgttgtat ccttttctcc ttgttatttg cccttcagaa tgcacttggg aaaggctggt 2761 tccttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //